Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1796 ATGGGAATTGAGAGAAAGAAGAAGAGTAGTAATGGATCTGTGTGGTCTATTTTCATGCATGCGGATACCCAAGACTGGCTTCTAATGGGTTTTGGTGTGTTAGGGTCCATTGGTGAAGGTTCCACCACTCCTCTTGTGCTCTATCTCAGTAGCCTCATTATGAACAATATTGGGACTTCTTCTACCATCTCATCAACCACTTTTGTCCATTGCATCAACAAGAATGCAGTGGCTTGGTTATATTTGGCTGCTGGAACATTCCTTGTTTGCTTCCTCGAGGGTTATTGTTGGACAAGAACAAGTGAGAGACAAGCAGCAAGAATGAGAGCAAAGTACCTGAAAGCAGTGATGAGACAAGAAGTTGCATATTTTGATTTGAATGTGACAAGTACCTCAGACATTATCACTGGCGTTTCCAATGATAGCCTCCTCATTCAGGATGTTATTAGTGAGAAGGTACCAAATTTGTTGATGAACTTTTCATTGTTCATTGGGAGCTACATAGCTGGTTTTGCAATGCTATGGAGATTGGCCATAGTAGGGATCCCATTCACAGTTCTTCTTGTAATCCCTGGCTTCATTTATGGCAAGACATTAATGGGATTAGCAAAGAAAATGAGAGAAGAGTATAATAAAGCAGGTGCAATAGCTGAACAAGCAATATGTTCAATAAGAACAGTGTATTCATATGTGGGAGAAAATAAGACCATAAATGCATTCTCTAATGCTCTTCAAGGGTCACTGAGTTTGGGAATCAAACAAGGGTTGGCTAAAGGTTTAGCCATTGGAAGCAATAATGGTATTGTTTTTGGTATATGGTCTTTTTTGTGTTATTATGGTAGCAGATTGGTCATGGACCATGGTGCTAAAGGAGGCACAGTTTTTTCAGCTGGAGCAGCTATCACTGTTGGTGGATTGGCACTAGGTGCTGGTTTAACCAACATGAAATACCTGAGCGAAGCAAGTTCAGCAGCGGAACGCATAAGGGAAGTCAATGAGAGAGTTCCGATGATCGATTCCGACGACAGTGACGGCGAAATCCTGGGAAGCGTTCGAGGGGAAGTAGAATTCCGAAACGTAGAGTTCGCGTACCCGACGAGACCAGAGACCGTTATTTTGAAGGGTTTGTGGCTCAAGATTCCGGCAGGGAAGACGGTGGCATTGGTGGGAGAGAGCGGTTCTGGAAAATCCACCATCATTGCGCTTTTGCAGCGGTTTTACGACCCTCTTGGTGGCGAAATAAGGTTTGATGGTGTTGCCATTGATAAGTTGCAGCTCAAGTGGTTCAGATCACAGATGGGGTTAGTGAGTCAAGAGCCCGTATTATTTGCCACCAGCATCAAAGAGAACATCCTGTTTGGGAAGGAGGATGCAACAGAGGCTGAGGTCATTGAGGCTGCAAAAGCTTCCAATGCTCATAATTTTATTTCCATGCTGCCTCAGGGTTATCAAACCCAGGTGGGTGAGAGAGGAACTCAAATGTCAGGTGGACAAAAGCAGAGGATTGCAATTGCTAGGGCCATAATTAAGAAGCCAAGAATGCTTCTTCTGGACGAAGCAACCAGTGCACTAGACTCCCACTCAGAGCGAATTGTCCAAAAAGCCCTCGAACAAGTGGCTGTTGGCTGCACCACCATCGTCGTCGCCCACCGCCTGTCCACGATTCGCAATGCCGACGTCATCGTTGCCATGCGAGCCGGAAAGGTGGTGGAGATGGGCACTCACGACGACCTCCTCTTGAATCATGATGGACTCTACTCCTCCATGGTTCGTCTCCAACAAACTGAGAATTCAGAAACAGATGAATCTGTAACTGCCCCAACAACTACTATTCATGTTCCTTCTTCTATGTCGGCTAGTGACACCGCTGATATTCACCACCTATGTTTAATTCATACAGATGATGATGACAACATTGAAAAGGTGGAAGAAGAGAAAGAGGAGAATAAGAACGCTCAGGCGACGGCATCGTTCTGGAGGCTGCTGGCACTGAACCTTCCGGAGTGGAAGCAAGCAGTTATGGGTTGCTTGAATGCGATGGTGTTCGGTGCAGTTCAACCGGTGTACACTTTGATTATGGGGTCGATGATGTTTGTGTATTTCGACAGCGATGATGAAGAGATAAAGAGGAAGACGAAGGAGTACTCGGTTTGCTTTGTGGGACTGTTTGTGTTGTCTTTGATTGTGAACATCGGGCAGCATTATAGCTTTGCATATATGGGAGAGTGCTTGACCAAAAGAATTAGAGAGACTATGTTTAAAAAGATACTCACCTTTGAAGTTTCCTGGTTTGATCTTTCTGAAAATTCTACCGGTGCTATTTGCTCTAGGCTTGCCAACGATGCAAATGTGGTGAGGTCTTTAGTGGGAGATAGGATTGGTTTAGTGGTGCAGACAGCGTCAGCGGTAGTAACAGCTTGGACTTTGGGTTTGGTCATTGCATGGAGACTGGCTATTGTTATGATATGTGTTCAACCCCTTATGATTGCATGCTTCTATACAAAACGTGTCCTTATCAAGACTATGTCAAAAAAGGTTGCAAAGGCGCAAGAAGAAAGTAGCAAGGTTGCCGCTGAAGCCGTTTCAAACCTAAGAACTATCACAGCCTTCTCTTCTCAAAACCGAATCCTCAAAATGCTCGAAAATGCACAAGAAGGACCAAGACGCGAGAATATCCGGCAATCATTTTACGCCGGAATCGGCCTTGCATGTTCCCAAGGCATAACATCATGTGTTTGGGCTCTAAACTATTGGTACGGTGGCAAGCTCGTCGCCGACGGTTACATCACCACAAAGGCATTGTTTCAAAGCTTCATGATTATTGTGAGTACAGCAAGAGTCATTGCCGACGCCGGAAGCATGACCTCGGACCTCGCAAAAGGCGCTGACGCCGTGTGCTCCATTTTCGCCGTCTTAGACCGGACCACGAAGATAGCGGCCGACGACGAAAATGGTCACAACCCGGAACATGTAACAGGACAAATACAACTCCATGATGTGCATTTTGCTTACCCCACTAGGCCAAACGTGACTATCTTCAAATCCTTTTCAATGAAAATAGAAGCTGGAAAGTCAACGGCATTGATAGGTCAAAGTGGATCCGGAAAGTCAACGATTATAGGGCTAATTGCAAGGTTCTATGATCCGCTAAGAGGGTACGTGACAATTGATAATAGAGATGTAAAGTCCTATAATTTGAAACAATTAAGGAGGCACATTGCACTTGTGAGCCAAGAACCTACGTTGTTCAATGGGAGCATAAGAGAGAACATTGCTTATGGATCTAATAACGGTGATGATGATAATGAAGTTGATGAGTCAGAGATCATAGAGGCGTCAAAATTAGCCATGGCACATGATTTTATTACCGGATTGAAGGACGGTTATGACACGTGGTGTGGCGAGAAGGGGTTACAGCTTTCAGGGGGTCAAAAGCAAAGGATAGCGATTGCAAGGGCTATATTGAAAAATCCAAGAGTGTTGTTATTGGATGAGGCAACTAGTGCCCTTGATATTCAATCGGAGAAAGTTGTTCAGGAAGCACTAGAGAGGGCTATGGTGGAGAGGACTAGCGTGATCGTCGCACATAGGATGTGTACCATAAAGAAATGTGATCTTATTGCTGTGTTGGAGAAGGGCATGGTTGTGGAAAGTGGGACCCACTCTTCTTTGTTGGCAAAAGGAACTGCTGGAGCTTATTGCAACTTTGTTAGGCTTCAGACTGGAACTAATTAG 3735 0.4485 MGIERKKKSSNGSVWSIFMHADTQDWLLMGFGVLGSIGEGSTTPLVLYLSSLIMNNIGTSSTISSTTFVHCINKNAVAWLYLAAGTFLVCFLEGYCWTRTSERQAARMRAKYLKAVMRQEVAYFDLNVTSTSDIITGVSNDSLLIQDVISEKVPNLLMNFSLFIGSYIAGFAMLWRLAIVGIPFTVLLVIPGFIYGKTLMGLAKKMREEYNKAGAIAEQAICSIRTVYSYVGENKTINAFSNALQGSLSLGIKQGLAKGLAIGSNNGIVFGIWSFLCYYGSRLVMDHGAKGGTVFSAGAAITVGGLALGAGLTNMKYLSEASSAAERIREVNERVPMIDSDDSDGEILGSVRGEVEFRNVEFAYPTRPETVILKGLWLKIPAGKTVALVGESGSGKSTIIALLQRFYDPLGGEIRFDGVAIDKLQLKWFRSQMGLVSQEPVLFATSIKENILFGKEDATEAEVIEAAKASNAHNFISMLPQGYQTQVGERGTQMSGGQKQRIAIARAIIKKPRMLLLDEATSALDSHSERIVQKALEQVAVGCTTIVVAHRLSTIRNADVIVAMRAGKVVEMGTHDDLLLNHDGLYSSMVRLQQTENSETDESVTAPTTTIHVPSSMSASDTADIHHLCLIHTDDDDNIEKVEEEKEENKNAQATASFWRLLALNLPEWKQAVMGCLNAMVFGAVQPVYTLIMGSMMFVYFDSDDEEIKRKTKEYSVCFVGLFVLSLIVNIGQHYSFAYMGECLTKRIRETMFKKILTFEVSWFDLSENSTGAICSRLANDANVVRSLVGDRIGLVVQTASAVVTAWTLGLVIAWRLAIVMICVQPLMIACFYTKRVLIKTMSKKVAKAQEESSKVAAEAVSNLRTITAFSSQNRILKMLENAQEGPRRENIRQSFYAGIGLACSQGITSCVWALNYWYGGKLVADGYITTKALFQSFMIIVSTARVIADAGSMTSDLAKGADAVCSIFAVLDRTTKIAADDENGHNPEHVTGQIQLHDVHFAYPTRPNVTIFKSFSMKIEAGKSTALIGQSGSGKSTIIGLIARFYDPLRGYVTIDNRDVKSYNLKQLRRHIALVSQEPTLFNGSIRENIAYGSNNGDDDNEVDESEIIEASKLAMAHDFITGLKDGYDTWCGEKGLQLSGGQKQRIAIARAILKNPRVLLLDEATSALDIQSEKVVQEALERAMVERTSVIVAHRMCTIKKCDLIAVLEKGMVVESGTHSSLLAKGTAGAYCNFVRLQTGTN* 1245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1796 1244 Pfam ABC transporter transmembrane region 675 944 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy4g1796 1244 Pfam ABC transporter transmembrane region 30 301 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy4g1796 1244 CDD ABC_MTABC3_MDL1_MDL2 995 1240 - -
Ahy4g1796 1244 Pfam ABC transporter 1014 1168 IPR003439 GO:0005524
Ahy4g1796 1244 Pfam ABC transporter 373 522 IPR003439 GO:0005524
Ahy4g1796 1244 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 18 1242 IPR039421 -
Ahy4g1796 1244 Gene3D - 345 594 IPR027417 -
Ahy4g1796 1244 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 984 1240 IPR027417 -
Ahy4g1796 1244 ProSitePatterns ABC transporters family signature. 1140 1154 IPR017871 GO:0005524
Ahy4g1796 1244 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 995 1237 IPR003439 GO:0005524
Ahy4g1796 1244 SUPERFAMILY ABC transporter transmembrane region 660 974 IPR036640 GO:0005524|GO:0016021
Ahy4g1796 1244 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 31 320 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Ahy4g1796 1244 SUPERFAMILY ABC transporter transmembrane region 23 339 IPR036640 GO:0005524|GO:0016021
Ahy4g1796 1244 CDD ABC_MTABC3_MDL1_MDL2 355 593 - -
Ahy4g1796 1244 CDD ABC_6TM_Pgp_ABCB1_D2_like 662 978 - -
Ahy4g1796 1244 Gene3D ABC transporter type 1, transmembrane domain 16 964 IPR036640 GO:0005524|GO:0016021
Ahy4g1796 1244 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 355 591 IPR003439 GO:0005524
Ahy4g1796 1244 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 347 593 IPR027417 -
Ahy4g1796 1244 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 18 1242 - -
Ahy4g1796 1244 SMART AAA_5 382 576 IPR003593 -
Ahy4g1796 1244 SMART AAA_5 1022 1220 IPR003593 -
Ahy4g1796 1244 ProSitePatterns ABC transporters family signature. 494 508 IPR017871 GO:0005524
Ahy4g1796 1244 CDD ABC_6TM_Pgp_ABCB1_D1_like 29 328 - -
Ahy4g1796 1244 Gene3D - 985 1243 IPR027417 -
Ahy4g1796 1244 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 679 960 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1796 Ahy-Chr4 106359189 106372028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1796 4 1244 Calmodulin-binding Proteins AT2G36910 40.949 0.0 976