Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1725 ATGATGCAGTCTAATGAGATTCTTCAATCTCCATCATCACTCTTTGATGAGCCATATTATTATTATGGGTTGAGTAGCATGGATGAAGATGGTGATGATTGTGGATTCAGTGCCATATTCAACACTTGTTCATCAGAAAACACCATCTTCACGAATGAATGTGATCATCACATTCAATACACAATCGATGATGAAACCTTGCAACTCCAACCCTTGATCCATGATTTCCCAATGAAATTCCAGGATCTGACTCACCAATTTCTTGAGAGTGAAGGAAGCATCATCCCTTCACAAGAAGCATATAGTCCCACCCAGTCATTCAATTCAGACATGTCCTCATCATCATCGACACCACTGAACTTGCCTCAACCGAACACGCAAATCGAGAACCACTTGATCCTACCGCACTTGGTGGACGCCATTGGAGAAGCCTTGGAGAATCGACACAAAGCGCTCGCTGAAGAGATCTTGAGATGCATCAGCAACAAACTCAGCCCTCTCTCCCAAATCGTTGACGAGCGCCTCCACTTTTACATGTCGCTAGCAACCGCCGCAAACAACGGAGACTATTTGAAAGGGGAAGCCTTGAAGAACTCTGACGCTGCTTTCAGGGCATTCTATCAAGGAACCCCTTTCGGCAAATTCGCTCACTTTGTGGCCCTTTCTGCAATTATTGAAAACATGCCGCCAGAGTGTGATGCCGTACACGTGATGGACTCTTACATGGGAATTGGGATCCAATGGATTCCAATGATTGAGGCCATGGCTCGGAGGAACATAACACAATTCAAATTGACATCAATCAGTTCCGGTCATCATCAGCAAGGGCATGATGGTAATTCCACTACTCCTTGGATTTCTGAGGAAACTAAGAGGCATCTCTATGAGCATGCAAGATCGTGTGGATTGAATCTGAAGGTGGAGGAAAAGGGAATTGAGGAACTTGTTGGTGAGTTGAAGAATGTGAAGAAAAGTGGTGGCAGTGGCATCAAAGAGTTTTTGGCCTTCAATTGCATGCTTAACCTGCCACATATGGCCAACAGAAGCAGCAGAAAACAAGCCATGGAATTTCTGAAGCTGGCTAAGGATTTGATCAATGGCTCTGGGAACAAGGGAATCATCACTTTTGGTGATGGTGATGCGTTTGAGAAACTCAAGACCAGCATGAATTTCAAGGCATTTTTTTATGGTCATTTGGTGCATTACCATGCATTAATGGAATCAATTGAGTCATGTTTCCCAACAAGTTTCTCAGAGGCAAGGACTCTTATAGAGTCCCTATTTGTGGCACCTTATGTGTCTCCTTTTGCTTGGTTACAAAATTGGCAAGAGATGGAGAGGGATTCTCCCCATGTTCCTGGGGAAGCTGAAATTGGACTAGAAGGTTGCAGATTGAGCACAAGTATTTTAATGGAAGCAAGAGAAATGTTGAGAGGTAGTGGAGGTTCGTATGAGACAAGGATTGAAGGGCAAAATGGGAATGAAATTGTTCTGGCATGGAAACGAACAGAACTAGTGAGAGTTTCTGCTTGGAGAAACTAA 1542 0.4384 MMQSNEILQSPSSLFDEPYYYYGLSSMDEDGDDCGFSAIFNTCSSENTIFTNECDHHIQYTIDDETLQLQPLIHDFPMKFQDLTHQFLESEGSIIPSQEAYSPTQSFNSDMSSSSSTPLNLPQPNTQIENHLILPHLVDAIGEALENRHKALAEEILRCISNKLSPLSQIVDERLHFYMSLATAANNGDYLKGEALKNSDAAFRAFYQGTPFGKFAHFVALSAIIENMPPECDAVHVMDSYMGIGIQWIPMIEAMARRNITQFKLTSISSGHHQQGHDGNSTTPWISEETKRHLYEHARSCGLNLKVEEKGIEELVGELKNVKKSGGSGIKEFLAFNCMLNLPHMANRSSRKQAMEFLKLAKDLINGSGNKGIITFGDGDAFEKLKTSMNFKAFFYGHLVHYHALMESIESCFPTSFSEARTLIESLFVAPYVSPFAWLQNWQEMERDSPHVPGEAEIGLEGCRLSTSILMEAREMLRGSGGSYETRIEGQNGNEIVLAWKRTELVRVSAWRN* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1725 513 ProSiteProfiles GRAS family profile. 125 512 IPR005202 -
Ahy4g1725 513 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 64 512 IPR005202 -
Ahy4g1725 513 MobiDBLite consensus disorder prediction 100 120 - -
Ahy4g1725 513 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 64 512 - -
Ahy4g1725 513 Pfam GRAS domain family 140 512 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1725 Ahy-Chr4 102300130 102301671 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1725 201 512 GRAS Transcription Factor Family AT3G60630 25.077 1.05e-11 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Ahy4g1725 GRAS 1.50E-33 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1725 - - adu:107485006 1023.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1933 14 110874170 110875711 Ahy4g1725 4 102300130 102301671 hybridization