Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1712 ATGATGATGATGATGAAGATGGTGGAAGAAGAAAGCCATGGATCAGAATGTTCTAAGACAAGAAGCCCTTGCAATGATGATAATAATAATAATGAAGATGATGGCTATTGTGAAGAAGAGAGTGAAACCAATAATGAAGAAGAAGTTGAAGAAGAAGATGAGAGTAGTTATAAGAAACAATACAAGAACAACAATGGTGGTGGTGGAGGGTGTTCAAGCAACAGCACAGTGGAAGAGAATAACGAGAAGAAGAGTTCATCAACATCAGTAAGACCTTACGTTAGATCCAAGTTGCCAAGGTTGCGTTGGACCCCTGATCTTCATCTTCGATTTGTTCATGCTGTTCAAAGACTTGGAGGACAAGAGAGAGCAACACCAAAATTGGTTCTTCAGTTGATGAATATCAAAGGTTTAAGTATTGCTCATGTCAAGAGTCATTTACAGATGTACAGGAGCAAGAAGGTAGAGGACACAAATCATCAAGTAATGGCTGATCATCATAGGCTTCTAATAGAAAATGGAGAGAGAAATAATGTTTATAATCTCAGCCAGCTTCCCATGCTTCAAAGTTATAGATATGGTCATGGATATGGAGTTGCTTCCGCTACTCTTGGTGTCTATGAAAACATGGCGCATAGGAACGCCAATTTGACTCATCATCATAGCATTTTTTCTCATAATTTTGGGGAACAATCATCAAGCCATCCTCATCCTCCTCATCATCATCATCATGAACAAAAAGATCATCAGTTTCTATCATTTGGAAATGGCCAAGGATCTTTATGCACGAATACTAATAACAATAGATTAATAAGCAGTCACATTGAAAAGCCTAGAGCTCAAGATTTCATGCCTACTAATACTAATAATAATTTGAAAAGAAAGGCTTCAGAAAATAGTGATATTGATTTGGACTTGTCTCTTAAATTAAATTCAAGGGTGGTTTTTAATGATGAGAAGCAATTAGGAAGAAGAAGCAGCATGATGATGATGATGATGATGGAGGAAGAAGAACACCATGAAGTTGTAGTTAATAGCAATCTATCACTCTCTTTGCACTCTCATCAATCCTCATCACCACAAGATCATTGTAATAAGGTGAAAGGTAAAAAGGCCACTACAAATTTGGATCTAAGAATCTGA 1143 0.3692 MMMMMKMVEEESHGSECSKTRSPCNDDNNNNEDDGYCEEESETNNEEEVEEEDESSYKKQYKNNNGGGGGCSSNSTVEENNEKKSSSTSVRPYVRSKLPRLRWTPDLHLRFVHAVQRLGGQERATPKLVLQLMNIKGLSIAHVKSHLQMYRSKKVEDTNHQVMADHHRLLIENGERNNVYNLSQLPMLQSYRYGHGYGVASATLGVYENMAHRNANLTHHHSIFSHNFGEQSSSHPHPPHHHHHEQKDHQFLSFGNGQGSLCTNTNNNRLISSHIEKPRAQDFMPTNTNNNLKRKASENSDIDLDLSLKLNSRVVFNDEKQLGRRSSMMMMMMMEEEEHHEVVVNSNLSLSLHSHQSSSPQDHCNKVKGKKATTNLDLRI* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1712 380 Pfam Myb-like DNA-binding domain 101 151 IPR001005 -
Ahy4g1712 380 MobiDBLite consensus disorder prediction 226 265 - -
Ahy4g1712 380 MobiDBLite consensus disorder prediction 60 91 - -
Ahy4g1712 380 PANTHER - 13 210 - -
Ahy4g1712 380 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 95 155 IPR017930 -
Ahy4g1712 380 MobiDBLite consensus disorder prediction 275 294 - -
Ahy4g1712 380 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 13 210 IPR044848 GO:0003700
Ahy4g1712 380 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 290 377 IPR044848 GO:0003700
Ahy4g1712 380 MobiDBLite consensus disorder prediction 251 265 - -
Ahy4g1712 380 PANTHER - 290 377 - -
Ahy4g1712 380 Gene3D - 98 155 - -
Ahy4g1712 380 MobiDBLite consensus disorder prediction 352 380 - -
Ahy4g1712 380 MobiDBLite consensus disorder prediction 1 91 - -
Ahy4g1712 380 MobiDBLite consensus disorder prediction 31 53 - -
Ahy4g1712 380 MobiDBLite consensus disorder prediction 364 380 - -
Ahy4g1712 380 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 99 154 IPR006447 GO:0003677
Ahy4g1712 380 SUPERFAMILY Homeodomain-like 98 153 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1712 Ahy-Chr4 101597087 101599608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1712 69 160 G2-like Transcription Factor Family AT2G42660 62.857 3.64e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Ahy4g1712 Myb_DNA-binding 1.10E-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1712 - - adu:107484994 625.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1929 14 110557847 110560044 Ahy4g1712 4 101597087 101599608 hybridization