Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1686 ATGGCTGATGCGAATGCGGCGATGTTCATTACCTTCCTGGAAGAGTGGATGGTTCGCCAAAGAAACTACCACCAAGAGCTTCTGACTGCGCAGGAAAACCGTCATCGACTCCGAGATTCCGATAAGATGGAACTCATAAACAGAGTACTCTGCCACTACGAGCAATACTTCGAAGAGAAATCAAAAATCGCCCAACGCGATATCTTCCTAGTGTTCTCGCCACCGTGGTTCAGTTCCTTGGAGAAGTCGTTCCTATGGATCGCCGGGTTCAAGCCAGGAAAAGCATTCCACCTCGTGAACCAGGCGGTACGCGACTTGACTAACGAACAACGGCGCAGGCTGAGCCAGCTCAGCATGGAGACGAGGATGAAGGAGAGAGACCTCAACGACGAGCTGGCCAAGGCTCACGAGAGCCTCGCAAGCCCGCCGCTCGTTGATACGGCGAGAACCCATGGCAGGGCGTGTCTGAGTCGCGCGAGGCCCACGCAGGCCCGAGAATTAGAAAGAGAAGCAGATGAAGGTCCTCCAAGCGAGCTTCGTGCGGCAATGGAGAGCGTTGTGACAAGTGCGGATGAACTGAGGACAAATACGGCATTAAATGTGCTGCAGATATTGAGGGCAGATCAGGCGGTTACTTTCTTGACAGCTGTTGCTGAGCTTCAGCTTAAGATCAGGTCCTTGGGGTTTGAGAAGGACGCACAAAGGGCAGCTGCTCAAAATCATTGA 726 0.5317 MADANAAMFITFLEEWMVRQRNYHQELLTAQENRHRLRDSDKMELINRVLCHYEQYFEEKSKIAQRDIFLVFSPPWFSSLEKSFLWIAGFKPGKAFHLVNQAVRDLTNEQRRRLSQLSMETRMKERDLNDELAKAHESLASPPLVDTARTHGRACLSRARPTQARELEREADEGPPSELRAAMESVVTSADELRTNTALNVLQILRADQAVTFLTAVAELQLKIRSLGFEKDAQRAAAQNH* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1686 241 ProSiteProfiles DOG1 domain profile. 6 234 IPR025422 GO:0006351|GO:0043565
Ahy4g1686 241 PANTHER TRANSCRIPTION FACTOR HBP-1B(C38)-LIKE ISOFORM X1 6 236 - -
Ahy4g1686 241 Pfam Seed dormancy control 25 100 IPR025422 GO:0006351|GO:0043565
Ahy4g1686 241 MobiDBLite consensus disorder prediction 158 179 - -
Ahy4g1686 241 PANTHER - 6 236 - -
Ahy4g1686 241 MobiDBLite consensus disorder prediction 162 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1686 Ahy-Chr4 100245924 100247623 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1686 3 227 Calmodulin-binding Proteins AT1G77920 26.872 9.35e-16 73.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1902 14 108995302 108996027 Ahy4g1686 4 100245924 100247623 hybridization