Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1669 ATGAATGTACCTTGGAAAACATCACCCTCCTTGAACATGGTCTTGGGCCTCAGACCCCAAAAGAAAAGAGCAGTTATGGGTTCCACTCGCTCAGATGGCTCTGCCAATGGCAAAGAACGCCTACGCTGGACACACGAACTCCATGATCGCTTTGTGCACGCTGTAAATAGGCTTGGGGGCCCTGATAGGGCAACACCAAAGGGTATATTGAAGGGGATGAAGGCCATGGGTGTTTCTGATCTCAGCATTTATCATGTCAAAAGTCACTTGCAGAAATACCGGATCTCCAAATTGATTCCAGAGTCTACCTCAAAAGGAAAGCCTGAGAAGAGAAGCATATCAAATACACTGCCAAATTTCAGTTCTACATGTGCTCTTCAGCTGAAGGAAATTCTTCAAATTCAGAGGGAGGTGCGAAACCGCTTGAGTGATCAAGCAGAGGTTCAGAGAAGGTTGAAGCAAAAAATTGAAGCACAAGAGAAATACCTTGATAGAATTGGACAAAGCCATGAAAGCAGAACAACAATCACTAGAAAATCTTCCAAGCCATCATCATTTTGTGCTACAAATAATAATAATAATAAACATCTCCCTTCTCTCTCTGAGGAATCAGAATCTATTATTGAGACACACCCTGAAGAAGTAGTAGAAGAAGAGGAAGAGCATCAATCATGTTCCAAAAGACAAAGGGTAGTAATAGATGAACATGTTTTTCCATCAAGCTTTGAACTTGAACTAGAATCATCCACCACCACAGAATTCATTGATCAATCATGGAATCTTTCATGGAGTCAACTTGCAGCTGCATGTGAATCACCTTTGATGCCAGGATTCTTATTATAA 843 0.4152 MNVPWKTSPSLNMVLGLRPQKKRAVMGSTRSDGSANGKERLRWTHELHDRFVHAVNRLGGPDRATPKGILKGMKAMGVSDLSIYHVKSHLQKYRISKLIPESTSKGKPEKRSISNTLPNFSSTCALQLKEILQIQREVRNRLSDQAEVQRRLKQKIEAQEKYLDRIGQSHESRTTITRKSSKPSSFCATNNNNNKHLPSLSEESESIIETHPEEVVEEEEEHQSCSKRQRVVIDEHVFPSSFELELESSTTTEFIDQSWNLSWSQLAAACESPLMPGFLL* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1669 280 MobiDBLite consensus disorder prediction 169 205 - -
Ahy4g1669 280 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 38 96 IPR006447 GO:0003677
Ahy4g1669 280 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 31 222 - -
Ahy4g1669 280 MobiDBLite consensus disorder prediction 178 205 - -
Ahy4g1669 280 SUPERFAMILY Homeodomain-like 38 95 IPR009057 -
Ahy4g1669 280 Gene3D - 37 98 - -
Ahy4g1669 280 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 31 222 IPR044848 GO:0003700
Ahy4g1669 280 Pfam Myb-like DNA-binding domain 41 94 IPR001005 -
Ahy4g1669 280 Pfam MYB-CC type transfactor, LHEQLE motif 127 166 IPR025756 -
Ahy4g1669 280 Coils Coil 139 159 - -
Ahy4g1669 280 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 35 98 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1669 Ahy-Chr4 98793165 98797482 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1669 23 163 G2-like Transcription Factor Family AT4G28610 46.939 1.47e-33 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Ahy4g1669 Myb_DNA-binding 6.30E-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1669 - - aip:107639556 480.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1891 14 107541366 107545930 Ahy4g1669 4 98793165 98797482 hybridization