Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1667 ATGGGTGTCGACTACTACAAGATTCTTGATGTCGATAGAAACGCTAAAGACGATGATCTCAAGAAGGCGTATCGAAAGCTTGCAATGAAGTGGCACCCTGATAAGAACCCTAACAACAAGAAGGACGCTGAAGCCAAATTCAAGCAAATCTCTGAAGCCTATGATATTTTGAGTGATCCTCAGAAGCGTGCAGTTTATGATCAGTATGGTGAGGAGGGGCTGAAGGGGCAGGTACCACCACCAGGTGGTGGCAGTGACAGCAGTTCTGCGAATTTCCAGTTCAATCCCAGAAGTGCAGATGATATATTTTCGGAGTTCTTTGGTTTCTCCAGTTCATTTGGTGGAATGGGGGACATGGGTGGTCGTGCTGGCGCATCTAGCTTTTCCAGGGGCGGCATGTTTGGTGATGATATCTTTTCTCAGTTTAGGAGTGGAGCTGGAGAGGGCTCTGCCCATATGCCAAGGAAAAGTGCACCAATAGAGATAATATTGCAATGTAGCTTGGAGGATTTGTATAAAGGGACATCGAAAAAGATGAAGATTTCGAGGGATGTTATTGATGCCAATGGAAAGCCCACCAAAGTAGAGGAAATCCTTACAATTGAGATCAAGCCAGGTTGGAAGAAAGGAACAAAAATAACTTTTCCAGCGAAGGGAAATGAGCAAAGAGGACATATCCCCGCAGACCTTGTGTTCATCATCGACGAGAAGCCGCATAGTGTCTTCAAGAGGGATGGCAATGATCTTGTTTTCACCCAGAAGGTATCCCTTGTAGAAGCTCTAACAGGTTACACGGTGCAGCTGACAACCCTTGACGGCCGAAACCTTACCATCCCCGTTAATTCAATCATTAGTCCGTCTTACGAAGAAGTCGTTAAAGGAGAGGGCATGCCAATTCCTAAAGAACCCTCCAAGAAAGGTAACTTGCGAATCAAGTTCAACATCAAGTTCCCGTCCAGGCTTACATCCGAGCAGAAAAACGGCATTAAGCGATTATTGACATCATATTCGTCTACATGA 1020 0.4539 MGVDYYKILDVDRNAKDDDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDILSDPQKRAVYDQYGEEGLKGQVPPPGGGSDSSSANFQFNPRSADDIFSEFFGFSSSFGGMGDMGGRAGASSFSRGGMFGDDIFSQFRSGAGEGSAHMPRKSAPIEIILQCSLEDLYKGTSKKMKISRDVIDANGKPTKVEEILTIEIKPGWKKGTKITFPAKGNEQRGHIPADLVFIIDEKPHSVFKRDGNDLVFTQKVSLVEALTGYTVQLTTLDGRNLTIPVNSIISPSYEEVVKGEGMPIPKEPSKKGNLRIKFNIKFPSRLTSEQKNGIKRLLTSYSST* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1667 339 Pfam DnaJ domain 4 67 IPR001623 -
Ahy4g1667 339 CDD DnaJ_C 158 321 - -
Ahy4g1667 339 PRINTS DnaJ domain signature 62 81 IPR001623 -
Ahy4g1667 339 PRINTS DnaJ domain signature 24 39 IPR001623 -
Ahy4g1667 339 PRINTS DnaJ domain signature 6 24 IPR001623 -
Ahy4g1667 339 PRINTS DnaJ domain signature 42 62 IPR001623 -
Ahy4g1667 339 CDD DnaJ 4 59 IPR001623 -
Ahy4g1667 339 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Ahy4g1667 339 Pfam DnaJ C terminal domain 160 318 IPR002939 -
Ahy4g1667 339 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Ahy4g1667 339 Gene3D - 159 237 - -
Ahy4g1667 339 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 335 - -
Ahy4g1667 339 Gene3D DnaJ domain 3 120 IPR036869 -
Ahy4g1667 339 MobiDBLite consensus disorder prediction 72 91 - -
Ahy4g1667 339 SUPERFAMILY Chaperone J-domain 3 117 IPR036869 -
Ahy4g1667 339 PANTHER DNAJ HEAT SHOCK FAMILY PROTEIN 1 335 - -
Ahy4g1667 339 SUPERFAMILY HSP40/DnaJ peptide-binding domain 241 327 IPR008971 GO:0006457|GO:0051082
Ahy4g1667 339 SUPERFAMILY HSP40/DnaJ peptide-binding domain 160 239 IPR008971 GO:0006457|GO:0051082
Ahy4g1667 339 Gene3D - 239 319 - -
Ahy4g1667 339 SMART dnaj_3 3 62 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1667 Ahy-Chr4 98761157 98764539 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1667 5 69 C2H2 Transcription Factor Family AT1G74250 34.783 3.60e-09 56.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1887 14 107439806 107443427 Ahy4g1667 4 98761157 98764539 hybridization
Ahy4g1667 4 98761157 98764539 Ahy12g2035 12 104112927 104116722 PCT
Ahy4g1667 4 98761157 98764539 Ahy2g1763 2 89761988 89765696 PCT
Ahy12g2035 12 104112927 104116722 Ahy4g1667 4 98761157 98764539 PCT
Ahy2g1763 2 89761988 89765696 Ahy4g1667 4 98761157 98764539 PCT