Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1666 ATGGCTGTCTCACTATGGAGAGCTCGCTTAGCTTCCTCTCTTGTCGCCAATCTCACCAACTCTCTTCGCCGTTTCTCTTCCGAAACAAATGCTCATAATGCTCGAGAGGCCATGATGAATCAGATGATGTATTCCGATATAAATTCTCGAATTGGGAGTTGTATGCCATTATCTTCTATGCGAATTGGAACTATCATTCACAATATTGAATTGAACCCGGGGCAAGGTGGCAAGCTGGTTAGAGCTGCTGGAACTTGTGCAAAAATCCTGAAAGAACCCACATCAAAATACTGTCTTATCCAGCTCCCCTCGGGTGTTAAAAAAATGATTGATTCTCGTTGCAGGGCCACCGTTGGTACTGTCTCAAATCCAAGCCACGGAGATAAGAAGCTTAGGAAGGCTGGACAAAGCCGGTGGCTTGGCCGTAGACCAGTTGTTCGAGGAGTGGCCATGAATCCAGTAGACCATCCTCATGGTGGAGGAGAGGGTAAGAGCAAGAGTAGTGGTCGGTGGGGAAAAGGATCTCGAACTCCTTGGGGTAAGCCGACTAAGAGTGGATTCAAGACCGGGCCCCTGAAACGAAGGAAGTAG 591 0.4805 MAVSLWRARLASSLVANLTNSLRRFSSETNAHNAREAMMNQMMYSDINSRIGSCMPLSSMRIGTIIHNIELNPGQGGKLVRAAGTCAKILKEPTSKYCLIQLPSGVKKMIDSRCRATVGTVSNPSHGDKKLRKAGQSRWLGRRPVVRGVAMNPVDHPHGGGEGKSKSSGRWGKGSRTPWGKPTKSGFKTGPLKRRK* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1666 196 SUPERFAMILY Translation proteins SH3-like domain 51 185 IPR008991 -
Ahy4g1666 196 Pfam Ribosomal Proteins L2, C-terminal domain 51 180 IPR022669 GO:0003735|GO:0005840|GO:0006412
Ahy4g1666 196 ProSitePatterns Ribosomal protein L2 signature. 144 155 IPR022671 GO:0003735|GO:0005840|GO:0006412
Ahy4g1666 196 PANTHER RIBOSOMAL PROTEIN L2 37 196 IPR002171 GO:0003735|GO:0005840|GO:0006412
Ahy4g1666 196 Gene3D - 40 121 IPR014722 -
Ahy4g1666 196 Gene3D Ribosomal protein L2, domain 3 122 196 IPR014726 -
Ahy4g1666 196 TIGRFAM rplB_bact: ribosomal protein uL2 45 192 IPR005880 GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740
Ahy4g1666 196 PANTHER 39S RIBOSOMAL PROTEIN L2, MITOCHONDRIAL 37 196 - -
Ahy4g1666 196 MobiDBLite consensus disorder prediction 150 196 - -
Ahy4g1666 196 SMART Ribosomal_L2_C_2 49 182 IPR022669 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1666 Ahy-Chr4 98686684 98688743 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1666 24 161 Cytoplasmic Ribosomal Protein Gene Family AT3G51190 40.816 1.95e-25 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1666 - - lang:109347761 317.775