Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1665 ATGGCCGAACTTCATTCCACTTCAAATTCAACTCTAACTCCTCCTCCATCTACTTCCGCGGGTAACAATGAATCTTCTGGAGCTTCACCATCGACTTCCCGAGGCCGTCGCAACGATCAGAACGCCGCTGACCGATCTCAGGCTCGATTCCGGTCGCCTGAAATTGAACCGATCGTTGGCCATGCTGGCAGAGTCATTGGCTGGGGAATCGGGGACGAGTCGTCGTCTGTTAGGGAAGATGCATGGTCATGCTTTGCTGTTGTATTCACGTTTTGGTTTTTCGTGTCAGTGACTATAATACTTGGGGTTTATGGGTCCATGAATCTCTTGCTTGGTCCAGAAACATCGATTGTGTTCCAACCTAGCCCTCTGTTCGTGCAATATCTCAGGGTAGAAAACTTAGAAGAAAAGCCAGGTCCTGTCGTGTATGGTACTTACCAATATCCAGATCTTGATGTTATTACCACTTGGGAACAAACTCTGCATGCAACTATTCCCTCTGACACACATCAGGAATGGATTTATTATCTGAATACTGGTTCAGAAGTGAATATTTCATATCACTTGAGCCCTGTGAGCTCCTCCGTTCTCCTTATAATTGCAGATGGGGCTGAAAGCCTCGCTCAGTGGATTGAATACCCTACATACCGTAATTCAACTCTCTCATGGAACATGATCCATGGAGCTGGTATGATTACACAGAAAATACACAGATCGTCGAGCTATTATGTAGCGTTGGGAAATTTGGATGAGGTGGTGCAGGTGGAACTAAACCTCACAGTTAGGGCCTACTTGCACAATACAAAGAATGCTTACTACAAATATGCCTTGGCAAGTAGAAGTTCGTGCAGTTTGAGCATTTTCTTTCCACAAGGAAACGCAGCTATCTTGACTACTCCTGGTCCACAAAAGAATGCATCAGATGATGAATGGTACGTCAAAGTGACCTATGGACCTAGATGGATCACATATATTGTAGGCATAGGTGGATTGACTTTGCTTATGTTTTGGGCATTCAACCTCTTGAACAATCTCCAGTTTGCCCGTGAAGAAAGAGCAGGAGTTATAAACAATGGGACGGCACCTGATAGAGGCCCTTTGCGCTCTCGAAAAGATGATGACCTTTCCAGCTGGGGTTCATCATATGATTCACTGTCACAAGATGACGAAGATCTTGACTCTCAGGCCGGAGGTTCCGCGGAGGGGAAGTCTCTAGGTGATGGAGAAATTAGTAACAATACTCGGCGTCTCTGTGCCATTTGCTTTGATGCTCCGAGGGATTGTTTCTTTCTTCCTTGTGGGCACTCTGCAGCTTGTTTTGAATGTGGAACTAGGATCGCCGAGGCTGCTGGTACTTGCCCTGTTTGTCGTAGGAACATGAAGAAAGTGAGAAAGATTTTTACTGTTTGA 1410 0.4567 MAELHSTSNSTLTPPPSTSAGNNESSGASPSTSRGRRNDQNAADRSQARFRSPEIEPIVGHAGRVIGWGIGDESSSVREDAWSCFAVVFTFWFFVSVTIILGVYGSMNLLLGPETSIVFQPSPLFVQYLRVENLEEKPGPVVYGTYQYPDLDVITTWEQTLHATIPSDTHQEWIYYLNTGSEVNISYHLSPVSSSVLLIIADGAESLAQWIEYPTYRNSTLSWNMIHGAGMITQKIHRSSSYYVALGNLDEVVQVELNLTVRAYLHNTKNAYYKYALASRSSCSLSIFFPQGNAAILTTPGPQKNASDDEWYVKVTYGPRWITYIVGIGGLTLLMFWAFNLLNNLQFAREERAGVINNGTAPDRGPLRSRKDDDLSSWGSSYDSLSQDDEDLDSQAGGSAEGKSLGDGEISNNTRRLCAICFDAPRDCFFLPCGHSAACFECGTRIAEAAGTCPVCRRNMKKVRKIFTV* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1665 469 PANTHER OS05G0521000 PROTEIN 2 469 IPR044586 GO:0004842
Ahy4g1665 469 Pfam Domain of unknown function (DUF4792) 139 207 IPR032008 -
Ahy4g1665 469 Pfam Domain of unknown function (DUF4793) 231 337 IPR032010 -
Ahy4g1665 469 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 401 469 IPR013083 -
Ahy4g1665 469 MobiDBLite consensus disorder prediction 1 37 - -
Ahy4g1665 469 SMART ring_2 418 456 IPR001841 -
Ahy4g1665 469 MobiDBLite consensus disorder prediction 358 407 - -
Ahy4g1665 469 Pfam Zinc finger, C3HC4 type (RING finger) 415 463 - -
Ahy4g1665 469 SUPERFAMILY RING/U-box 417 463 - -
Ahy4g1665 469 PANTHER E3 UBIQUITIN-PROTEIN LIGASE APD1-RELATED 2 469 - -
Ahy4g1665 469 MobiDBLite consensus disorder prediction 1 50 - -
Ahy4g1665 469 ProSiteProfiles Zinc finger RING-type profile. 418 457 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1665 Ahy-Chr4 98647709 98653347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1665 391 466 C3H Transcription Factor Family AT3G06140 27.632 4.53e-06 47.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1885 14 107240060 107245912 Ahy4g1665 4 98647709 98653347 hybridization