Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1655 ATGGCGTCTCACCAACAAGAGCCATGGCTTCTAGAGAATGGAAATGTGAAGGTGTTGACTAAGGAAATGCGGCACGGCCATGGCCGGAGCCGTACTGCCCACAACATGTCGTCCTCTTCTCTTAGGAAGAAATCCGACCGGACCCTGGTGTCGAAGGTTCGGTGCGGATTGCTAAGGAATTTGTTGGTTAACATCCAAGAAGTTATTCTGGGGACAAAGTTGTCCATCTTGTTCCCAGCAATTCCCATTGCCATCATTGCCCAATGCTATGGCCTTGGAAGACCATGGATTTTCGCATTGAGCTTACTTGGGCTTACACCGCTTGCTGAGCGTGTCAGCTTCCTCACAGAACAAGTTGCAATTTACACTGGTCCTACAGTTGGAGGGCTTCTAAATGCAACATGTGGAAATATTACTGAGCTGGTGATAGCAATATTTGCACTGAGTAGTAACAAAGTTGATTTGGTGAAGTATTCTCTACTGGGTTCTATCCTCTCAAACCTTCTGCTGGTTCTTGGAACCTCTCTCTTGTGTGGTGGCATTGCAAACCTTGCAAAGGAACAAAAATATGACAGAAGACAAGCAGATGTGAACTCTCTAATGCTTCTGCTGGCATTGTTGTGCCACTTGCTTCCAATGCTGTTCAGATACGGCGGTGGTGGCTCGGACGACGCTCTCGCGGCCGCGGACTCATCGCTGTACTTGTCGAGGGCCGCCAGCATTACCATGTTGGTTGCATATTTTGCTTACCTTATCTTTCAGCTGTGGACACACAGGACATTGTTTGAAGCTGAAGATGAGGATGGAGATGGTGAGAATGGTTCAGATGATGAAGAAGCTGTGATTGGAGTGTGGAGTGGTGTTGCATGGCTGGCTGGGATGACTGTCTTCATTGCCTTGTTATCTGAATATGTGGTGGACACAATTGAGGAAGCATCAGAGTCATGGGGTCTCTCTGTAAGCTTTCTCAGCATAATTTTGCTACCAATTGTTGGCAATGCAGCTGAACATGCAGGAGCAATCATATTTGCTTTCAAGAACAAGCTGGATATCACGTTGGGTGTTGCATTAGGTTCTGCCACGCAAATTGGCATGTTTGCGGTTCCTCTATGTGTACTGATTGCTTGGATAATGGGTGTTAAAATGGATCTAAACTTCAACCTCCTAGAAACCGGTTCTCTTGCTTTGGCAATAATAGCCACATCCTTTACTTTACAGGATGGTACATCTCACTACATGAAAGGGCTTATTCTTCTTTTGTGCTACGTTGTCATTGGTGCTTGCTTCTTTGTACAAAGAACACCCTTAAACCAAGTGAATGTTAACATCACATTCAAGTCAGCAAGTGATGCAGTTTTAAATGCTTAA 1368 0.4547 MASHQQEPWLLENGNVKVLTKEMRHGHGRSRTAHNMSSSSLRKKSDRTLVSKVRCGLLRNLLVNIQEVILGTKLSILFPAIPIAIIAQCYGLGRPWIFALSLLGLTPLAERVSFLTEQVAIYTGPTVGGLLNATCGNITELVIAIFALSSNKVDLVKYSLLGSILSNLLLVLGTSLLCGGIANLAKEQKYDRRQADVNSLMLLLALLCHLLPMLFRYGGGGSDDALAAADSSLYLSRAASITMLVAYFAYLIFQLWTHRTLFEAEDEDGDGENGSDDEEAVIGVWSGVAWLAGMTVFIALLSEYVVDTIEEASESWGLSVSFLSIILLPIVGNAAEHAGAIIFAFKNKLDITLGVALGSATQIGMFAVPLCVLIAWIMGVKMDLNFNLLETGSLALAIIATSFTLQDGTSHYMKGLILLLCYVVIGACFFVQRTPLNQVNVNITFKSASDAVLNA* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1655 455 Gene3D - 125 284 IPR044880 -
Ahy4g1655 455 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 1 443 - -
Ahy4g1655 455 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 1 443 IPR004713 GO:0006812|GO:0008324|GO:0016021
Ahy4g1655 455 TIGRFAM cax: calcium/proton exchanger 79 430 IPR004798 GO:0006816|GO:0015369
Ahy4g1655 455 Pfam Sodium/calcium exchanger protein 288 425 IPR004837 GO:0016021|GO:0055085
Ahy4g1655 455 Pfam Sodium/calcium exchanger protein 96 256 IPR004837 GO:0016021|GO:0055085
Ahy4g1655 455 TIGRFAM caca2: calcium/proton exchanger 60 430 - -
Ahy4g1655 455 MobiDBLite consensus disorder prediction 24 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1655 Ahy-Chr4 98142202 98147204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1655 1 439 Antiporters AT2G38170 66.216 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1655 K07300 - gmx:100779440 658.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1866 14 106126693 106131756 Ahy4g1655 4 98142202 98147204 hybridization
Ahy4g1655 4 98142202 98147204 Ahy12g2028 12 103935971 103941376 PCT
Ahy4g1655 4 98142202 98147204 Ahy2g1755 2 89601083 89605994 PCT
Ahy12g2028 12 103935971 103941376 Ahy4g1655 4 98142202 98147204 PCT
Ahy2g1755 2 89601083 89605994 Ahy4g1655 4 98142202 98147204 PCT