Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1653 ATGGTAGGTACAGAGGTTGATGCAAATGGGAATGGCTCATTGAAGTTGAAGCCAAGTGAGAGCAGAGGAAAGAACATCCAATGCAGAGCTGCGGTGGCTTATGGTCCTGGAGAACCCTTTGTGGTGGAACAAGTTATTGTTTATCCTCCTCAGAAAATGGAGGTTCGGATCAAGATCCTCTACACTTCAATATGTCATACCGATCTAGCATGTTGGAAAGCTGAGAATGAAGCTCAGCGCGCTTTTCCTCGGATTTTTGGCCATGAAGCTTCCGGGGTTGTGGAGAGTGTGGGAGAAGGAGTAACAGACATAAGAGAAGGGGACATAGTGGTGCCAATATTCAACGGAGAATGTGGAGAATGCTGTTACTGCAAGAGTTCCGTAACAAACATGTGTGAGAGGTTTGGCGTGAACCCAATGAAGAAGGTTATGGAAAGTGATGGAAAAAGCAGGTTCACAACGGTTCAAGGAAAACCGATTTACCATTTCTTGAACACATCAACTTTTGCTGAGTACACCGTCGTTGACTCTGCTTGTGTGGTCAACATCAACCCTCAACTCGCTCCAAGCCTCAAACAACTTACCCTCATCAGTTGCGGTGTCTCCACCGGAGTTGGAGCTGCTTGGAACAGTGCAAATGTGCATGCTGACTCCACTGTTGCAATTTTTGGCTTAGGTGCTGTGGGGCTTGCTGTTGCAGAAGGGGCACGAGCTAGGGGTGCATCAAAAATAATAGGTGTGGACATTAATCCAGACAAATTCATCAAAGCCCAAGCTATGGGAGTCACAGATTTCATAAATCCAAGAGATGAAGAGAAACCAGTGAATGAGAGAATCAAGGAAATGACCGGAGGAGGTGTAGATTACAGTTTTGAATGTGCTGGCAACTTGGACGTTCTAAGGGAAGCCTTCTTGTCTGCTCATGAGGGTTGGGGATTGACTGTAGTACTAGGAATTCACTCAAAACCAGAATTGCTTCCAATTCACCCAATGGAGCTGTTCAATGGTCGCAGAATGATAGGATCAGTTTTTGGAGGTTTCAAAGGGAAAACCCAGTTGCCTCATTTTGCCAATGAATGCATGCATGGAGTGGTAAATCTAGACAAGTTCATCACACACGAGCTTCCATTTGATGAGATTAACAAAGCCTTTGATCTTCTGATTGCTGGAAAATCACTGAGATGTATCCTACACCTCTAA 1200 0.4508 MVGTEVDANGNGSLKLKPSESRGKNIQCRAAVAYGPGEPFVVEQVIVYPPQKMEVRIKILYTSICHTDLACWKAENEAQRAFPRIFGHEASGVVESVGEGVTDIREGDIVVPIFNGECGECCYCKSSVTNMCERFGVNPMKKVMESDGKSRFTTVQGKPIYHFLNTSTFAEYTVVDSACVVNINPQLAPSLKQLTLISCGVSTGVGAAWNSANVHADSTVAIFGLGAVGLAVAEGARARGASKIIGVDINPDKFIKAQAMGVTDFINPRDEEKPVNERIKEMTGGGVDYSFECAGNLDVLREAFLSAHEGWGLTVVLGIHSKPELLPIHPMELFNGRRMIGSVFGGFKGKTQLPHFANECMHGVVNLDKFITHELPFDEINKAFDLLIAGKSLRCILHL* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1653 399 PANTHER ALCOHOL DEHYDROGENASE 21 398 - -
Ahy4g1653 399 Gene3D - 31 394 - -
Ahy4g1653 399 MobiDBLite consensus disorder prediction 1 20 - -
Ahy4g1653 399 SUPERFAMILY GroES-like 349 398 IPR011032 -
Ahy4g1653 399 Gene3D - 204 342 - -
Ahy4g1653 399 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 87 101 IPR002328 GO:0008270|GO:0016491
Ahy4g1653 399 SUPERFAMILY GroES-like 22 218 IPR011032 -
Ahy4g1653 399 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 191 363 IPR036291 -
Ahy4g1653 399 Pfam Alcohol dehydrogenase GroES-like domain 54 182 IPR013154 -
Ahy4g1653 399 CDD alcohol_DH_plants 26 398 - -
Ahy4g1653 399 Pfam Zinc-binding dehydrogenase 227 347 IPR013149 -
Ahy4g1653 399 PANTHER ALCOHOL DEHYDROGENASE-LIKE 3 21 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1653 Ahy-Chr4 98061249 98081902 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1653 54 388 Monolignol Biosynthesis Gene Families AT2G21890 28.116 7.80e-15 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1653 K00001 - gmx:100787307 602.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1864 14 106048738 106065297 Ahy4g1653 4 98061249 98081902 hybridization