Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1637 ATGAGTGCAAGCACAAGCCGCGGCGGCGGCGGTAGCAGCAGTGGCGCTAGTGGGAGTGGTACCAAAAGTAGGGGTAGTGGCAGTGGCGGTCCTTGCGGCGCTTGCAAGTTTCTGAGGAGGAAATGTGCTCCGGGATGCGTCTTTGCGCCGTACTTTGATCCAGATCAAGGTGCAACCTACTTTGCGTCGGTGCACAAGGTTTTTGGGGCTAGCAACGTTGGTAAGCTTCTTTCGAAAATTCCAGTTCATAAGAGGCTTGATGCTGTTATTACTATTTGTTATGAAGCACAAGCACGAATGAGAGATCCTGTTTATGGATGTGTTGGTCAAATCTTTACCCTTCAACAACAGGTGTTGGCTTTACAAGCCGAACTCTCATTCTTACAAAATCATCTTGCTACAATGGAGATACGCCAACCGCCACCAATTCCTCCAACGCAAGGAGTGCCGACATCAACTATTTTCTCAGTTGCGGACTTACCAATGGTTGTGGGCGTTGCCTCCGCCACCTTATCAATGCCGGCCACCTTTGATCCATCTTCCCACTTTGATCTAGCAACGGCTCAAGCTTCTTGGGCTGTGTATCAACGGGCCATGATGGACCCACGCCAATACATGGCTGTTGCCAACCCAATAGGCCCAACTGCAGGTGGTGGTGTTGATCTCCAAACAGTTGCACGTGAGCTCATCAATAGGCATGTGCCTCCACAAGCACCACCTCAGACTTTTGGTTCCAATGCTGCATCGACGTCAGCTCCATCGCTTAGTTCTTCTAAGTGA 780 0.5038 MSASTSRGGGGSSSGASGSGTKSRGSGSGGPCGACKFLRRKCAPGCVFAPYFDPDQGATYFASVHKVFGASNVGKLLSKIPVHKRLDAVITICYEAQARMRDPVYGCVGQIFTLQQQVLALQAELSFLQNHLATMEIRQPPPIPPTQGVPTSTIFSVADLPMVVGVASATLSMPATFDPSSHFDLATAQASWAVYQRAMMDPRQYMAVANPIGPTAGGGVDLQTVARELINRHVPPQAPPQTFGSNAASTSAPSLSSSK* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1637 259 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 234 - -
Ahy4g1637 259 MobiDBLite consensus disorder prediction 234 259 - -
Ahy4g1637 259 MobiDBLite consensus disorder prediction 1 26 - -
Ahy4g1637 259 Pfam Lateral organ boundaries (LOB) domain 31 129 IPR004883 -
Ahy4g1637 259 MobiDBLite consensus disorder prediction 238 259 - -
Ahy4g1637 259 PANTHER LOB DOMAIN-CONTAINING PROTEIN 18 1 234 - -
Ahy4g1637 259 MobiDBLite consensus disorder prediction 1 28 - -
Ahy4g1637 259 ProSiteProfiles LOB domain profile. 30 132 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1637 Ahy-Chr4 96439444 96452025 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1637 34 259 AS2 family AT2G45420 49.784 9.41e-70 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy4g1637 LOB 6.90E-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1637 K21994 - twl:119982189 249.21