Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1589 ATGCTTCAGATTCGGCTTAGTAAGGCTCCTGCCTCAGAAGGGTCGGCAGGGGTTAAGCCCCCACCTGTTGAGACTGTTACCGTCGCTTGCCCTGACCATCTGGTTCTTGCTGATCTACCTGTTGCAAAGGGCATTGGATCAGCTACTGCTGCTTCGCTTGTCAAGACGTTGGGCCGTAGATCACGCCGCCAGCTCGGTGAGCGGGTCCATTTCTGCGTTCGCTGTGATTTTCCAATTGCTATATATGGACGACTGAGCCCTTGTGAGCATGCATTTTGTCTCGATTGTGCTAGAAGTGATTCAATGTGCTACCTGTGTGATGAACGAATCCAAAAGATTCAGACAATCAAAATGATGGAAGGAATCCTCATATGTGCAGCTCCTCATTGTCTCAAGTCTTTCTTGAAGAAGGCTGAATTTGAGTCTCATATCCAAGACAGCCACTCTAACCTCCTTCGACCAAATGCAGATAAAGAAGATGGAAATGAGTCCGAGGTACAGAGTGTTAGGCAATCTACGGCTTCAGATGCTCGAGGTCCACAAAGGCCAGTTTTCTCTCCTGGATCAAATTCGCAGCAGCATGATCCAGAAGACAAAACACGTCGACAGCCACCAAGAGATCAACCACCTTCAAGGGGAAATCTGCAGCCAAAGCCACCATTTTTTGGTCAACAAAATCACCCTTCTGACCCCATGCCAAGCTCTGGTTTAGGGATTCAACAGAGCTTCCATCAACAAAGTTTTGACATGCCACATCCCACCCAAGAACCTTCCCTGTTTGGTGACAGGCAGCAATCAATTGGTCCAGAGACCTCATTTCCTGAGTATCCACCAATGCATTCTGGTCCCAATATGCCTACAATGGTTGCTTCAAACCCAATGATGAACCCTCCTATGCCATTTGGTTATCCCCCTTACCCACAGGATCGTGCTCAACCGTTTTATGGTGCTCCCTATGATATACCTAGGCAGGATTCGGCATCTGATATGGGTGGAGACCAGAGTTCGTTACTGGGTTTCCCACAAGGGGTCCCAGGTGGCCCAAATTTCCCTGGAAATTATCCCCAGCCCTGGCATGCAGGAATTGGTGGTGTGCCTTTTGAACAAGGACCGGGTGGTATGGTTGTGGATCCAAGGGATGCCAAAGGCGTATTGGCACCACAGCCCATGAGCCTCCCACCGCCACCACCGCCTCCACCCCACATGTCACACATGAAGCAGAATTACTATCCTGGTGATGTTGGGCATGAAGGTCAGGGTTATGGATGGCAACATGATAGTCGTGATAGCTTTGGTGGCCAAGGCTAG 1308 0.4969 MLQIRLSKAPASEGSAGVKPPPVETVTVACPDHLVLADLPVAKGIGSATAASLVKTLGRRSRRQLGERVHFCVRCDFPIAIYGRLSPCEHAFCLDCARSDSMCYLCDERIQKIQTIKMMEGILICAAPHCLKSFLKKAEFESHIQDSHSNLLRPNADKEDGNESEVQSVRQSTASDARGPQRPVFSPGSNSQQHDPEDKTRRQPPRDQPPSRGNLQPKPPFFGQQNHPSDPMPSSGLGIQQSFHQQSFDMPHPTQEPSLFGDRQQSIGPETSFPEYPPMHSGPNMPTMVASNPMMNPPMPFGYPPYPQDRAQPFYGAPYDIPRQDSASDMGGDQSSLLGFPQGVPGGPNFPGNYPQPWHAGIGGVPFEQGPGGMVVDPRDAKGVLAPQPMSLPPPPPPPPHMSHMKQNYYPGDVGHEGQGYGWQHDSRDSFGGQG* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1589 435 MobiDBLite consensus disorder prediction 388 404 - -
Ahy4g1589 435 MobiDBLite consensus disorder prediction 166 193 - -
Ahy4g1589 435 PANTHER E3 UBIQUITIN-PROTEIN LIGASE HAKAI 1 409 - -
Ahy4g1589 435 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 69 120 IPR013083 -
Ahy4g1589 435 MobiDBLite consensus disorder prediction 383 435 - -
Ahy4g1589 435 ProSitePatterns Zinc finger RING-type signature. 88 97 IPR017907 -
Ahy4g1589 435 ProSitePatterns Zinc finger C2H2 type domain signature. 125 148 IPR013087 -
Ahy4g1589 435 MobiDBLite consensus disorder prediction 146 165 - -
Ahy4g1589 435 MobiDBLite consensus disorder prediction 218 271 - -
Ahy4g1589 435 MobiDBLite consensus disorder prediction 146 282 - -
Ahy4g1589 435 CDD RING-HC_HAKAI_like 70 106 IPR040380 -
Ahy4g1589 435 PANTHER E3 UBIQUITIN-PROTEIN LIGASE HAKAI-RELATED 1 409 IPR040383 GO:0016567|GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1589 Ahy-Chr4 91008288 91014592 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1589 1 432 C2H2 Transcription Factor Family AT5G01160 43.764 1.93e-106 317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1791 14 101491705 101498026 Ahy4g1589 4 91008288 91014592 hybridization