Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1563 ATGGTTGAGTCAACAACAAATGCATTGATGACGATGATGATGGAGGAGGAAGTCATACTAATGTCTTCTAATTCTAATTCTAATTCCAATTCCAATTCTTCTTGTTCAGAAGGGTCAGAGGATGATGACCTTGTTAAAGAGCTTTTAGATGATGCCACTCCTCTTCTTCTTCCGCCTTCGGACCACTACAACACAATAATAAGGCCGCCGCCTTCTGACGGTGACGGTGATGATTATGACCACGCCATTAACAGCTTCATATCCAACATTTACTCAGGTCCGACAATCTCAGACTTTGAAAATGCTTTGTCAGTGATCAATAATAGTAACAACCACCAAAGCGATCAGCATTTGGAACACCTCTCATCAGCAAGGGTTTCCATATTGGAAAGGGGTTTGAGTAAAATTGAGAACAAGTATACGCTCAAATTCAAGTGCTTTGGCAATGGGATGGGTGATGATGGATATAAGTGGAGGAAGTATGGTCAAAAATCTATTAAGAATAGCCCAAATCCTAGGAGCTACTATAGATGCACGAATCCAAGGTGCAGTGCAAAGAAGCAAGTTGAGAGATCCAATGAGGACCCAGACACACTTATCATCACTTACGAAGGTCTTCACTTGCACTTTGCCTACCCTCATTTTCTCACAGGACAACCACACCAATCGCAATCAGATCCTCCAATCAAGAAGCCCAAGCCCATGCCTACAGCTTCACCAGAAAACAAAGCCCAAGAAATTCTAGAAGCCAAGGATGTCCAAGCCAACCCTACTTTGGGCTTAATTCAAACAACTTTAACTGACTCCCAAGAAGATATGGCCAATGTTAATTTGGGCTCACAAGGCCTGCTTGAAGATATGGTGCCATTCATGGTTAGGAACCCCCATAACAATGGCAATAGCACTAACTCACTTTTTTCTTGTTCTTCTCAACCAACTACACCTCCTTCGCTGTGGTTTCCAAATTATTCAACGTCCTGTCATACTGTTGGCTTGAATTTTAGCAATTAG 1011 0.4224 MVESTTNALMTMMMEEEVILMSSNSNSNSNSNSSCSEGSEDDDLVKELLDDATPLLLPPSDHYNTIIRPPPSDGDGDDYDHAINSFISNIYSGPTISDFENALSVINNSNNHQSDQHLEHLSSARVSILERGLSKIENKYTLKFKCFGNGMGDDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCSAKKQVERSNEDPDTLIITYEGLHLHFAYPHFLTGQPHQSQSDPPIKKPKPMPTASPENKAQEILEAKDVQANPTLGLIQTTLTDSQEDMANVNLGSQGLLEDMVPFMVRNPHNNGNSTNSLFSCSSQPTTPPSLWFPNYSTSCHTVGLNFSN* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1563 336 SMART WRKY_cls 152 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy4g1563 336 ProSiteProfiles WRKY domain profile. 147 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy4g1563 336 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 35 304 IPR044810 GO:0003700
Ahy4g1563 336 MobiDBLite consensus disorder prediction 23 42 - -
Ahy4g1563 336 Gene3D WRKY domain 148 205 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy4g1563 336 PANTHER WRKY TRANSCRIPTION FACTOR 49-RELATED 35 304 - -
Ahy4g1563 336 MobiDBLite consensus disorder prediction 216 241 - -
Ahy4g1563 336 SUPERFAMILY WRKY DNA-binding domain 150 209 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy4g1563 336 Pfam WRKY DNA -binding domain 153 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy4g1563 336 MobiDBLite consensus disorder prediction 23 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1563 Ahy-Chr4 88918317 88922032 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1563 35 294 WRKY Transcription Factor Family AT5G43290 40.647 2.20e-47 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy4g1563 WRKY 6.90E-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1763 14 100272529 100276137 Ahy4g1563 4 88918317 88922032 hybridization