Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1558 ATGGTATATAAATCTTCACCTGGTGAGATGAAACTTGAGGAAGATCTCGGCCCGGATCGGGAGGACGACTTCCAAACGGACGACGAAGAAAACCAGGGGAACAGGGTGTTTGATAATTTGGATGATGATTCTGAATCGGATTCATCAGTTCTTTCGCAAAAATTGTCCAATGATAATATCATGCCTTCTTGGCCTCAAAGCTATCGGCAATCCATGGACATGTTAACGAGTGTAACACCACCTGGAATTAGTTTCATAAGGCGAATTGGCTCAAAAGGAAGTAGTAATAATCAGTATTTGACTACAGCATTCAAGAGATCTCAAGAATGGAAGCAAGAGGATTCTTCTTTGGCTAAACCTCTTGTCTCGGATCAACTAAAAGAAGTGGAGAATGGTGTTTCAGAAGAACAACCTGCGAGACAGCAGTCAAGTGTATTTCAACATTCCAAGTTTTCTCTTGATGATTTGCCACCACCACAACACCAATGCTCATTTGCACAGTCAGTTATTAATGGAACGAATATATTATGTGGGATAGGACTTCTTACGATTCCATATGCTATAAAAGAAGGAGGATGGTTGAGCCTTACAATCCTTATATTATTTTCTATCATTTGTTGTTATACTGGAATTTTACTGAAAAGATGTTTGGAAAGCAACCCTGGACTCAAAACATATCCAGATATCGGCCAAGCCGCCTTTGGAGTAGTTGGTCGCTTAGGGATTGCGATATTCTTGTACATGGAATTGTACGCAGCTGCTGTTGAGTTTATAACACTAATGAGTGATAACCTCTCATCACTGTTTCCTAATGTCCACATCAAAGTTGGTGGGATAGATTTGGAGACTCATGTGTTTTTTGCAATCACTGCAGCTCTTATGGTTCTTCCTACTGTTTGGCTTCGAAATCTAAGCCTTCTTTCTTATATCTCAGCTGGAGGAATATTTGCAACAATAATGGTGACATTATGCTTGTTTTGGGTTGGGTTGGTTGATCATGTTGGATTGAAACCAGGAAGAAAACTTTTAGACCTTGAAAACATTTCTGTATCAGTTGGTCTATATGGTTTTGGTTTTGCTGGCCATGCTGTTTTCCCAAATGTCTACTCTTCTATGCAGGATCCATCAAGATTCCCATCAGTTCTATATCTTAGTTTTGCCTTTTGTCTTTTTATGTACATGAGTGTTGGTGCAGTTGGATATTTAACTTTTGGCGAGTCAGTTGAGTCTCAATTTACTTTAAACATGCCCAAAGAGTTATATGCATCAAAGATTGCAACCTGGACAACTGTTATAACACCATTGGCAAAATATGCACTAACGATATTACCCATTGCATTGAGTATAGAGGAACTTATCCCTAACAACAAGCTAAGATGTCATGCCACAGCTATTGCTATTAGAACATTTTTAGTGATTTCAAGTTTGGTTGTGGCCCTCTCTGTTCCTTATTTCGGTGCTTTGATGGCGCTAATTGGTGCTTTTATGTCAATGACAGTTGCACTTATTTATCCTTGTGCGTGTTATCTAAAGATACACAACGGTAGATTATCAAAACTTGAGATAACAAAGTGTGTATTAGTTATTATTGTGGGGGTGCTAAGCTCTATCGTTGGAACATATTCTGCTCTATTAAGAATAGCTAATGGAGACGACTAA 1659 0.3882 MVYKSSPGEMKLEEDLGPDREDDFQTDDEENQGNRVFDNLDDDSESDSSVLSQKLSNDNIMPSWPQSYRQSMDMLTSVTPPGISFIRRIGSKGSSNNQYLTTAFKRSQEWKQEDSSLAKPLVSDQLKEVENGVSEEQPARQQSSVFQHSKFSLDDLPPPQHQCSFAQSVINGTNILCGIGLLTIPYAIKEGGWLSLTILILFSIICCYTGILLKRCLESNPGLKTYPDIGQAAFGVVGRLGIAIFLYMELYAAAVEFITLMSDNLSSLFPNVHIKVGGIDLETHVFFAITAALMVLPTVWLRNLSLLSYISAGGIFATIMVTLCLFWVGLVDHVGLKPGRKLLDLENISVSVGLYGFGFAGHAVFPNVYSSMQDPSRFPSVLYLSFAFCLFMYMSVGAVGYLTFGESVESQFTLNMPKELYASKIATWTTVITPLAKYALTILPIALSIEELIPNNKLRCHATAIAIRTFLVISSLVVALSVPYFGALMALIGAFMSMTVALIYPCACYLKIHNGRLSKLEITKCVLVIIVGVLSSIVGTYSALLRIANGDD* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1558 552 MobiDBLite consensus disorder prediction 49 65 - -
Ahy4g1558 552 MobiDBLite consensus disorder prediction 1 65 - -
Ahy4g1558 552 PANTHER OS05G0424000 PROTEIN-RELATED 46 547 - -
Ahy4g1558 552 Pfam Transmembrane amino acid transporter protein 162 543 IPR013057 -
Ahy4g1558 552 PANTHER AMINO ACID TRANSPORTER AVT1D 46 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1558 Ahy-Chr4 88142292 88157838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1558 10 549 Amino Acid or Auxin Permease AAAP Family AT5G02180 51.619 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1558 K15015 - pop:7468814 613.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1758 14 99766363 99777753 Ahy4g1558 4 88142292 88157838 hybridization