Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1524 ATGGTAGCAGGAGCTTTGTTCACTGTAATGGGCTATTACTTTCAGAGGAAAAGGATCAAAAGAGAGATCCAAAAAAGAATAACAAGCAAGGCACACTTCGTACTCAACTCAGACAACAATGGTAGATCTGCAAAAGTTTTCACCATAAAGGAAATCACAAAAGCAACCAACAACTTCTCGAAATCCAACCTCCTCGGCGCCGGCGGCTTCGGCGAGGTATTCAAAGGTGTTCTGAACGACGGAACCGTCACAGCCATCAAGAGAGCAAAGCATGGCAACATAAGAGGCATTGATCAAATCCTCAATGAGGTTAAGATCCTTTGCCAGGTCAACCATAGAAGCTTAGTGAGGCTTTTGGGTTGTTGTGTTGAGCTTCCAAATGAGCCTCTTCTTATATATGAGTATGTCTCCAATGGCACCCTCTTTGACCACCTTCACAACAGGAACTCCAGCAAATGGATCCGTCTTGGGTGGCATTCAAGGCTAAGAATCGCACACCAAACAGCTGAAGGACTTGCGTATCTTCACGATGCAGCCATACCCAAAATCTACCATAGAGATATCAAGTCAAGCAACATTCTCTTGGACGAAAAACTCGACGCAAAGGTCTCAGATTTCGGGCTTTCGAGGTTAGCGGCCAGCGAAGCGACCCACGTGACAACCTGCGCTCAAGGGACACTGGGCTACCTTGACCCAGACTACTACGTGAACTTTCAGCTCACAGAGAAAAGTGATGTGTATAGCTTCGGTGTTGTTCTGTTAGAGCTACTGTGTTCTAAGAAGGCTATTGATTTCAATAGAGAAGAGGGGGATGTGAATTTGGTTGTTATGGTGAAGAAGGCCTTGAAGGAAGGGATGTTAATGGATAAAGTGGTTGATCCAATGCTGAAAATTGGAGCTAGTAAGTTGGAGTTGGAGAGTATGAGGGCTTTTGGGTCTCTTGCTGTTGGGTGCTTGGATGATAGAAGGGACAATAGGCCCTCAATGAAAGATGTTGCTAACGAGATTGAGTGCATTATTGGTATTTTTGCTGATGCTAAGGCTATGGGGTATTAA 1056 0.4498 MVAGALFTVMGYYFQRKRIKREIQKRITSKAHFVLNSDNNGRSAKVFTIKEITKATNNFSKSNLLGAGGFGEVFKGVLNDGTVTAIKRAKHGNIRGIDQILNEVKILCQVNHRSLVRLLGCCVELPNEPLLIYEYVSNGTLFDHLHNRNSSKWIRLGWHSRLRIAHQTAEGLAYLHDAAIPKIYHRDIKSSNILLDEKLDAKVSDFGLSRLAASEATHVTTCAQGTLGYLDPDYYVNFQLTEKSDVYSFGVVLLELLCSKKAIDFNREEGDVNLVVMVKKALKEGMLMDKVVDPMLKIGASKLELESMRAFGSLAVGCLDDRRDNRPSMKDVANEIECIIGIFADAKAMGY* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1524 351 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 15 16 342 - -
Ahy4g1524 351 Pfam Protein kinase domain 60 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g1524 351 ProSiteProfiles Protein kinase domain profile. 59 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g1524 351 ProSitePatterns Serine/Threonine protein kinases active-site signature. 183 195 IPR008271 GO:0004672|GO:0006468
Ahy4g1524 351 PIRSF ILK 40 348 - -
Ahy4g1524 351 ProSitePatterns Protein kinases ATP-binding region signature. 65 87 IPR017441 GO:0005524
Ahy4g1524 351 SUPERFAMILY Protein kinase-like (PK-like) 43 339 IPR011009 -
Ahy4g1524 351 Gene3D Transferase(Phosphotransferase) domain 1 136 345 - -
Ahy4g1524 351 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 16 342 IPR045274 GO:0007166
Ahy4g1524 351 CDD STKc_IRAK 65 337 - -
Ahy4g1524 351 SMART serkin_6 59 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g1524 351 Gene3D Phosphorylase Kinase; domain 1 32 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1524 Ahy-Chr4 83310621 83311959 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1524 9 344 Receptor kinase-like Gene Family AT5G02070 61.877 2.21e-149 434
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Ahy4g1524 Pkinase 3.60E-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1524 - - adu:107484566 689.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1711 14 94807477 94816097 Ahy4g1524 4 83310621 83311959 hybridization