Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1502 ATGCAAGCGCAGGCGCGAATGACGGTTGAAGGTGCGCAGAGGGTGGTGAACGATGGTGGTCATGGCGGGAGGAAGGTGTTGCAGCATCAGCAGCAAAGTCAGCAACCGCCGCAGATGGGAACTGTGTCTCAGCTTCTTGCCGGTGGCATAGCAGGCGCCTTTGGAAAGACCTGCACTGCTCCACTTTCACGCCTCACTATTCTTTTTCAGGTGCAAGGTATGCAATTTGATGTGGCAGCAGCAGCGTTGAGCAAGCCTAGCATATGGTGTGAGGCCTCACGCATTGTCAATGAAGAAGGATTTAGAGCATTTTGGAAAGGCAATTTGGTGACAGTAGCCCATCGACTTCCTTATACCGCAGTCAACTTCTATGCCTATGAACGCTACAAGAGTATAATACATTCAATTTTGGGGGAGAAACTCGGAGGAAATACAAGTACAAGCCCCTTTGTGCACTTCATAGGTGGTGGTTTATCTGGCATAACAGCTGCTACTGCCACATATCCGTTGGATCTAGTGAGAACCCGACTTGCCGCACAGAGAAGTGCCATTTACTACAATGGCATCTCCCATGCCTTTAATACAATATGCAGGGAAGAAGGCTTCTTGGGTCTTTACAAGGGACTTGGAGCAACATTATTGGGTGTTGGGCCGAGTATAGCGATAAGTTTTTCTGTTTATGAAGGCTTACGTTCATTTTGGAAGTTGCAAAGGCCTGATGATTCAACAATCATGATCAGTCTTGCTTGTGGCAGTCTTTCAGGCATTGCATCATCAACAGCAACATTTCCTTTGGATCTAGTAAGGCGCCGGATGCAGTTAGAGGGGCTTGGGGGTCGAGCTCGCATCTATAATACCAGTCTGTTGGGAACATTTGGACACATAATTCAGAATGAAGGGGTACGAGGTTTGTATAGAGGCATTTTGCCTGAGTACTACAAGGTTGTTCCTGGCGTGGGCATTGTCTTTATGACTTATGAGACATTAAAGATCCTTATATCAAGCATTCAGAGTTATTAA 1020 0.4676 MQAQARMTVEGAQRVVNDGGHGGRKVLQHQQQSQQPPQMGTVSQLLAGGIAGAFGKTCTAPLSRLTILFQVQGMQFDVAAAALSKPSIWCEASRIVNEEGFRAFWKGNLVTVAHRLPYTAVNFYAYERYKSIIHSILGEKLGGNTSTSPFVHFIGGGLSGITAATATYPLDLVRTRLAAQRSAIYYNGISHAFNTICREEGFLGLYKGLGATLLGVGPSIAISFSVYEGLRSFWKLQRPDDSTIMISLACGSLSGIASSTATFPLDLVRRRMQLEGLGGRARIYNTSLLGTFGHIIQNEGVRGLYRGILPEYYKVVPGVGIVFMTYETLKILISSIQSY* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1502 339 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN 9 338 - -
Ahy4g1502 339 Pfam Mitochondrial carrier protein 242 333 IPR018108 -
Ahy4g1502 339 Pfam Mitochondrial carrier protein 147 234 IPR018108 -
Ahy4g1502 339 Pfam Mitochondrial carrier protein 39 133 IPR018108 -
Ahy4g1502 339 ProSiteProfiles Solute carrier (Solcar) repeat profile. 242 332 IPR018108 -
Ahy4g1502 339 PRINTS Mitochondrial carrier protein signature 44 57 IPR002067 GO:0055085
Ahy4g1502 339 PRINTS Mitochondrial carrier protein signature 206 224 IPR002067 GO:0055085
Ahy4g1502 339 PRINTS Mitochondrial carrier protein signature 162 180 IPR002067 GO:0055085
Ahy4g1502 339 PRINTS Mitochondrial carrier protein signature 57 71 IPR002067 GO:0055085
Ahy4g1502 339 PRINTS Mitochondrial carrier protein signature 107 127 IPR002067 GO:0055085
Ahy4g1502 339 PRINTS Mitochondrial carrier protein signature 251 273 IPR002067 GO:0055085
Ahy4g1502 339 ProSiteProfiles Solute carrier (Solcar) repeat profile. 147 233 IPR018108 -
Ahy4g1502 339 Coils Coil 336 339 - -
Ahy4g1502 339 ProSiteProfiles Solute carrier (Solcar) repeat profile. 39 132 IPR018108 -
Ahy4g1502 339 PANTHER SOLUTE CARRIER FAMILY 25 9 338 - -
Ahy4g1502 339 MobiDBLite consensus disorder prediction 1 38 - -
Ahy4g1502 339 SUPERFAMILY Mitochondrial carrier 38 329 IPR023395 -
Ahy4g1502 339 Gene3D Mitochondrial carrier domain 36 335 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1502 Ahy-Chr4 81948844 81951835 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1502 1 338 Organic Solute Cotransporters AT3G55640 66.077 6.02e-158 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1502 - K14684 gmx:100788060 516.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1594 14 81818757 81823366 Ahy4g1502 4 81948844 81951835 hybridization