Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1490 ATGGCTGCAAATGGAGAAGAAGTGAAGCTCTTGGGGGTTGCAGCAAGCACATTTGTTTGCAGGGTGCAGCTGGGTCTCAATTTGAAGGGAGTTGAATACAAATTTGTGGAGCAAGATCTTGAGAACAAGAGTGAAGAGCTCCTAAAATATAATCCAATTCACAAGAAGGTACCTGTGCTTGTTCATAACGAGAGACCCATAAGTGAGTCCCTTGTGATTCTTGAGTACATCGATGACACTTGGAAAGTTAATCCTTTCTTGCCTGCTGAACCTTACCAGAGAGCAATGGCTCGTTTCTGGGCCAAGTTCATAGATGACAAGGTTTTGCTTGCATCATGGACATCTGTTTTTTCCAATGATGAGAAAGAACGTGAGAAGAATATTAGAGAATCAGATGAGGCACTGAAGTTTCTTGAGGATGAGCTGAAGGGAAAGTTTTTCGGAGGAGAGGAGATTGGGTTTGTGGACATTGCTGCTGTTTATATTGCATTTTGGGTCCCTCTGATTCAAGACATTGGAGGACTGCAATTGTTGACCAATGAGAAATTTCCCAAACTTTATAATTGGAGCCAAGAATTTCTCAACCATCCAATTGTCAAAGAAACTATGCCTCCTAGAGACCCACTATTTGCCTTCTTCAAAGCTCGCTATGATAATCTTATTGCTTCGGAGTAA 675 0.4178 MAANGEEVKLLGVAASTFVCRVQLGLNLKGVEYKFVEQDLENKSEELLKYNPIHKKVPVLVHNERPISESLVILEYIDDTWKVNPFLPAEPYQRAMARFWAKFIDDKVLLASWTSVFSNDEKEREKNIRESDEALKFLEDELKGKFFGGEEIGFVDIAAVYIAFWVPLIQDIGGLQLLTNEKFPKLYNWSQEFLNHPIVKETMPPRDPLFAFFKARYDNLIASE* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1490 224 CDD GST_N_Tau 8 81 - -
Ahy4g1490 224 Gene3D - 90 224 - -
Ahy4g1490 224 Pfam Glutathione S-transferase, N-terminal domain 7 78 IPR004045 -
Ahy4g1490 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 212 IPR010987 -
Ahy4g1490 224 SUPERFAMILY GST C-terminal domain-like 79 219 IPR036282 -
Ahy4g1490 224 Gene3D Glutaredoxin 1 89 - -
Ahy4g1490 224 CDD GST_C_Tau 91 216 IPR045074 GO:0004364|GO:0006749
Ahy4g1490 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Ahy4g1490 224 SUPERFAMILY Thioredoxin-like 8 108 IPR036249 -
Ahy4g1490 224 PANTHER GLUTATHIONE S-TRANSFERASE-RELATED 1 220 - -
Ahy4g1490 224 SFLD Glutathione Transferase (cytosolic) 5 221 IPR040079 -
Ahy4g1490 224 Pfam Glutathione S-transferase, C-terminal domain 101 197 IPR004046 -
Ahy4g1490 224 SFLD Main.3: Omega- and Tau-like 5 221 IPR045073 -
Ahy4g1490 224 Coils Coil 121 141 - -
Ahy4g1490 224 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 220 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1490 Ahy-Chr4 81270580 81272272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1490 6 223 Glutathione S-transferase Gene Family AT3G09270 52.036 5.75e-77 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1490 K00799 - gmx:100806714 337.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1854 14 105725899 105729964 Ahy4g1490 4 81270580 81272272 hybridization
Ahy14g1674 14 91757333 91758731 Ahy4g1490 4 81270580 81272272 hybridization