Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1435 ATGCTTGAGTTGAAAACAGAAGCGTGCTGTCTGGAGAATAAGCAATCCACTGCTGCTTCTTGCTCCTCTGTTTCCGAAGGCAGTGGCAGCCCAATTAACAAGTCCACAGAGATGTGTAGCCCTGCATCTACATCGCCCTCACACCGGAGGACCACTGGCCCTATAAGGCGTGCAAAGGGAGGTTGGACAGCAGAAGAGGATGAGACATTAAGGAATGCTGTTGCAACTTACAAGGGCAAGAATTGGAAGAAAATAGCTGAGTATTTTCCTGATAGAACAGAAGTTCAATGCCTTCACAGATGGCAAAAAGTTCTCAATCCAGAACTTGTTAAAGGACCTTGGACATTGGAGGAGGATGATAAAATTGTTGAACTGGTCTCCAAATTTGGGCCTACAAAATGGTCTCTTATAGCCAGGTCTTTGCCTGGTCGAATAGGGAAACAGTGCCGAGAGCGATGGCACAATCATCTTAATCCTGACATAAAGAAAGATGCCTGGACTTTGGACGAGGAATTGGCCCTGATAAATGCTCATCATACCCATGGGAACAAATGGGCTGAAATAGCCAAGGTTCTTCCTGGAAGAACTGATAATGCAATAAAGAACCACTGGAATAGTTCTTTGAAGAAAAAGTTGGATTTTTATTTAGCTACAGGAAGACTTCCACCAGTGCCAAAGAACAATGCACAAGTTGCTGTCAAAGATACAATTAGACTTTCTACTTCTAAAACAATTCCTGTTTGTTCAAGTAAAGAATTAAATTTAGCTGTTAAAACACCATCTGAACCTACAACTATTAGTATGCTAGATGAGAGTGGCATGAATCAGTCATCCCCAGGGACAGTTAGAGATGTTCGTGATTCTTCAAGTGTTCCTGCTAATGAATCTGCTGATTCTGACGGTGTAGAATGCAAACCTGGATCATCCAACATAGATCTCGCCTGTAGCAACTCAAAGCCTGTGTCAATAGTTAATTTCAGAATAACTTGTGGGACAAATTTTGAGAATTCTGGACTAAGTGTAAACTCAAAGTTTGAGCGGTGTGTAGACAATTGTGAAATGAGTTGCAGCAGCAGGTCTATCAGAACTTCTTTCTCCCAAGAAAGTCCTACCTGTGGTTCTTTGTGTTATGAGCCGCCTCAGTTAAGTGGTTCAGTTCCTTTAGATTATCTTTCTTTAAGCCTGCAGAATGAGTACTGCTCTAATCCGATGTTGTCGCCTATCGATTACTTCACTCCAGCTAGTGTGAAGGGTAGTGAATTATGCAGTGAGACACCTGAATCATTTTTGAAAAAAGCTGCTGATACTTTTCCAAACACTCCTTCCATATTGAGGAGGAGACGGAACAGAGTCGAAACACAAACCCCTCCTTGTAAACTTTTGAAGGTAGAAAATCATTCTTGTACTTCTAATGAATCAGAGGGAACCAAGGATAATTCTGGTTCTGAGGTTGGGAGGTTCTCTGAGAATCCAGCAAGCCATGACAATGAGAGTGACCTTCCCAAGGCTTACAATGCATCTCCACCATACCAGTTGAGATCCAAGCGAACAGCTGTTCTCAAGTCCGTGGAGAAACAACTAGAATTTGCATTTGAGGAAAAAAAATGA 1608 0.4216 MLELKTEACCLENKQSTAASCSSVSEGSGSPINKSTEMCSPASTSPSHRRTTGPIRRAKGGWTAEEDETLRNAVATYKGKNWKKIAEYFPDRTEVQCLHRWQKVLNPELVKGPWTLEEDDKIVELVSKFGPTKWSLIARSLPGRIGKQCRERWHNHLNPDIKKDAWTLDEELALINAHHTHGNKWAEIAKVLPGRTDNAIKNHWNSSLKKKLDFYLATGRLPPVPKNNAQVAVKDTIRLSTSKTIPVCSSKELNLAVKTPSEPTTISMLDESGMNQSSPGTVRDVRDSSSVPANESADSDGVECKPGSSNIDLACSNSKPVSIVNFRITCGTNFENSGLSVNSKFERCVDNCEMSCSSRSIRTSFSQESPTCGSLCYEPPQLSGSVPLDYLSLSLQNEYCSNPMLSPIDYFTPASVKGSELCSETPESFLKKAADTFPNTPSILRRRRNRVETQTPPCKLLKVENHSCTSNESEGTKDNSGSEVGRFSENPASHDNESDLPKAYNASPPYQLRSKRTAVLKSVEKQLEFAFEEKK* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1435 535 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 162 212 IPR017930 -
Ahy4g1435 535 ProSiteProfiles Myb-like domain profile. 106 157 IPR001005 -
Ahy4g1435 535 MobiDBLite consensus disorder prediction 264 296 - -
Ahy4g1435 535 Gene3D - 164 235 - -
Ahy4g1435 535 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 59 105 IPR017930 -
Ahy4g1435 535 MobiDBLite consensus disorder prediction 464 489 - -
Ahy4g1435 535 SUPERFAMILY Homeodomain-like 56 119 IPR009057 -
Ahy4g1435 535 PANTHER MYB PROTEIN-RELATED 19 475 - -
Ahy4g1435 535 CDD SANT 113 157 IPR001005 -
Ahy4g1435 535 PANTHER MYB-RELATED PROTEIN B-LIKE 19 475 - -
Ahy4g1435 535 Gene3D - 58 110 - -
Ahy4g1435 535 ProSiteProfiles Myb-like domain profile. 54 105 IPR001005 -
Ahy4g1435 535 MobiDBLite consensus disorder prediction 21 51 - -
Ahy4g1435 535 MobiDBLite consensus disorder prediction 264 305 - -
Ahy4g1435 535 Gene3D - 111 162 - -
Ahy4g1435 535 Pfam Myb-like DNA-binding domain 111 157 IPR001005 -
Ahy4g1435 535 Pfam Myb-like DNA-binding domain 163 206 IPR001005 -
Ahy4g1435 535 Pfam Myb-like DNA-binding domain 59 105 IPR001005 -
Ahy4g1435 535 ProSiteProfiles Myb-like domain profile. 158 208 IPR001005 -
Ahy4g1435 535 CDD SANT 62 105 IPR001005 -
Ahy4g1435 535 SMART sant 58 107 IPR001005 -
Ahy4g1435 535 SMART sant 110 159 IPR001005 -
Ahy4g1435 535 SMART sant 162 210 IPR001005 -
Ahy4g1435 535 MobiDBLite consensus disorder prediction 462 514 - -
Ahy4g1435 535 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 106 161 IPR017930 -
Ahy4g1435 535 MobiDBLite consensus disorder prediction 21 64 - -
Ahy4g1435 535 CDD SANT 165 208 IPR001005 -
Ahy4g1435 535 SUPERFAMILY Homeodomain-like 108 204 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1435 Ahy-Chr4 73893779 73899116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1435 49 535 MYB Transcription Factor Family AT5G02320 49.900 2.23e-135 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy4g1435 Myb_DNA-binding 6.90E-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1435 K09422 - gmx:778081 781.171