Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1431 ATGGAGAGGGTGAAGGCGGAGGTGACTACGTTGAAGGCCCAGCTAGCTACTTCAGAGGAGAAGTTGACGGCCTCTAACGCGGCGGTCGCCTGGCTTTCCGAGTGCGAGCTCGCCTTGGAAGGCCATGTTTCTGCTGCGCAAGCTCGGATAATGATGTGCTTTGATATGCTACTTGGAAAATCATCAGCATCCGCATGCTACGGGTACGAGGACGAGGGAACGATGATTGCAGCTGCAAGGGAGGGAATATACAACAATGGAGGTGCATGTGGCCAAATGTATAAGATCACATGCACAGGTGCGACCAACGCCGGCGTCACTCAACCGTGCACCGGCGCCAGTGTTACCGTCAAGGTTGTCGATCTTTGTCCCTCTCCAGGCTGCCAGGGAACATTTGATCTCTCTCAAGAAGCTTTCTCTACGATAGCTAACATCAATGCTGGAAAAGTTGATATTGACTGTACCCCGTAA 471 0.5244 MERVKAEVTTLKAQLATSEEKLTASNAAVAWLSECELALEGHVSAAQARIMMCFDMLLGKSSASACYGYEDEGTMIAAAREGIYNNGGACGQMYKITCTGATNAGVTQPCTGASVTVKVVDLCPSPGCQGTFDLSQEAFSTIANINAGKVDIDCTP* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1431 156 Gene3D - 46 155 IPR036908 -
Ahy4g1431 156 Coils Coil 1 21 - -
Ahy4g1431 156 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 59 156 IPR007112 -
Ahy4g1431 156 SMART dpbb_1 76 154 IPR007112 -
Ahy4g1431 156 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 61 154 IPR044206 GO:0009627|GO:0048046
Ahy4g1431 156 Pfam Lytic transglycolase 78 152 IPR009009 -
Ahy4g1431 156 SUPERFAMILY Barwin-like endoglucanases 62 153 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1431 Ahy-Chr4 73630309 73631841 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1431 42 152 Expansin Gene Family AT5G39310 30.709 3.76e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1431 - - adu:110280746 224.172