Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy4g1422 | ATGGTGGTGGTGATAGAGCAGCAAGAGATCAAGGATCGAAACGCCAATCCCTCCAGGGTGGTTGCCGGTAACGAGGCTTTCGATGGTTTTGAAACGGCCAGCGACACCGACCTTGGCAGTGACAACGGAGGGGATGACGTCGGATCTAGCAGCCATGATCAACCGCTCGAGCAACCGCAGCAGCAACATCAACAGCAGCAGCTGAAGATAGAACATTTGGAGGCGGAGCCGGAGCAGAGTGTTTCTCCAAGTAATAGTTGCCCTGGGGATCTCTTGATCAATGAGGAGTTGGAGAAGAAAGCAATGGTTCAAGCAAATGAAGCAAAGGCAGAAGGGAACAAGCTTTTTGTGGATGGGAAGTATGAGGAAGCATTATCCCAGTATGAACTTGCTTTACAAGTTGCATCTGACATGTCTTCATTGGTTGAAATACGCTCAATATGCCATGCAAACCGTGCTGTGTGCTTTCAGAAACTGGGAAAATATGACAACACAGTTAAAGAATGCACAAAAGCACTAGATCTGAATCCAGTGTACATTAAAGCTTTAGTAAGAAGAGGAGAAGCTCATGAAAAGCTTGAACATTTTGAAGAAGCCATTGCTGATATGAAAAAGATCTTAGAAATTGATCCCTCAAATGATCAAGCTAGGAAGGCCATCAGGCGACTTGAGTCGCTTGCTGCAGAAAAGCGGGAAATGATGAAGGAAGAGATGATTGCAAAACTAAAAGAAATGGGAAATTCTTTCCTGGGCCGTTTTGGGATGAGTGTCGATAACTTCAAAGCATGGTGCTAA | 795 | 0.4528 | MVVVIEQQEIKDRNANPSRVVAGNEAFDGFETASDTDLGSDNGGDDVGSSSHDQPLEQPQQQHQQQQLKIEHLEAEPEQSVSPSNSCPGDLLINEELEKKAMVQANEAKAEGNKLFVDGKYEEALSQYELALQVASDMSSLVEIRSICHANRAVCFQKLGKYDNTVKECTKALDLNPVYIKALVRRGEAHEKLEHFEEAIADMKKILEIDPSNDQARKAIRRLESLAAEKREMMKEEMIAKLKEMGNSFLGRFGMSVDNFKAWC* | 265 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy4g1422 | 264 | ProSiteProfiles | TPR repeat profile. | 180 | 213 | IPR019734 | GO:0005515 | |
Ahy4g1422 | 264 | MobiDBLite | consensus disorder prediction | 1 | 67 | - | - | |
Ahy4g1422 | 264 | Coils | Coil | 213 | 236 | - | - | |
Ahy4g1422 | 264 | Pfam | Tetratricopeptide repeat | 181 | 213 | IPR013105 | - | |
Ahy4g1422 | 264 | PANTHER | TETRATRICOPEPTIDE REPEAT PROTEIN 1 | 56 | 262 | - | - | |
Ahy4g1422 | 264 | SMART | tpr_5 | 105 | 138 | IPR019734 | GO:0005515 | |
Ahy4g1422 | 264 | SMART | tpr_5 | 146 | 179 | IPR019734 | GO:0005515 | |
Ahy4g1422 | 264 | SMART | tpr_5 | 180 | 213 | IPR019734 | GO:0005515 | |
Ahy4g1422 | 264 | Coils | Coil | 56 | 76 | - | - | |
Ahy4g1422 | 264 | Gene3D | Tetratricopeptide repeat domain | 56 | 244 | IPR011990 | GO:0005515 | |
Ahy4g1422 | 264 | MobiDBLite | consensus disorder prediction | 35 | 67 | - | - | |
Ahy4g1422 | 264 | Pfam | Tetratricopeptide repeat | 150 | 177 | IPR019734 | GO:0005515 | |
Ahy4g1422 | 264 | SUPERFAMILY | TPR-like | 104 | 229 | IPR011990 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy4g1422 | Ahy-Chr4 | 72389154 | 72393626 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy4g1422 | 74 | 249 | Calmodulin-binding Proteins | AT3G25230 | 34.536 | 1.51e-16 | 77.0 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy4g1422 | K24926 | - | gmx:100808386 | 319.701 |