Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1421 ATGGAAGTCGTTGAGGAAACGGTTGTGAAAGTAGAGGAAAGCCAAGCAGAAGAAGAAGACGATGATGCCGCAATATCAAAAGTTTTTCCATGCCTATACTGCACAAGAACTTTCTACAGTTCTCAAGCTTTAGGGGGCACCAAAATGCTCACAGAAAAGAGAGAAGAACCAGAAGAAACACCGAGAGGGCTTCTGCTGAGTACTCGTATCTTCTATTTGCTTCTTCGCTGTCGACCCCTCCTAAGGTTTTTCCTTCAGCGTTCATCACTGGCCATGCAACAAATCTCGCATATTTCCCAAGCCTCCATATTTCAGAAGGATTTAGATCAGATGACGCACATGAATTTGCTGGAGATAATGGTGTTTCCTTACCGATTAAGTGAGGATATTGTTGAGAGAAGTTTCGCTGATTGGCAAAGAAGCCTTAGAAGCAGTGGCTTCAACAGTGTTGACACATCTCAACTAATATCATTACTGAAGAGTGACACTCAAAACCTTGAGACAAGGACCTATTGTGCAGAGAAATATCAAGAAATTGATTTATCTCTCCATTTGTAG 558 0.4194 MEVVEETVVKVEESQAEEEDDDAAISKVFPCLYCTRTFYSSQALGGTKMLTEKREEPEETPRGLLLSTRIFYLLLRCRPLLRFFLQRSSLAMQQISHISQASIFQKDLDQMTHMNLLEIMVFPYRLSEDIVERSFADWQRSLRSSGFNSVDTSQLISLLKSDTQNLETRTYCAEKYQEIDLSLHL* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1421 185 PANTHER PROTEIN LATE FLOWERING 12 47 - -
Ahy4g1421 185 PANTHER ZINC FINGER PROTEIN JAGGED 12 47 IPR045320 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1421 Ahy-Chr4 72388275 72388832 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1421 1 53 C2H2 Transcription Factor Family AT5G48890 39.623 4.35e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1421 - - adu:107484060 328.176