Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1417 ATGGAGTGTGAAGTGGGAGTTCAAGGTTTGGATCTGCATGCAAAGGTGGCAAAAACGGAAACAGTAGACCCTATTCTTGGTTTTGGAGCCATGAATCATCATCACCACAACAATCATCATCATCATGATGCAGAGATTTATGCAGATGCTGATGATGCAGATAAAGATTTGTGGCTCAACACAACAACAGAACAAGAAGATTTACTTGTTGGGGATGTGAAAACAGATGCATCTATGTTCTACGACCAATTCCCTCCTCTCCCTGATTTCCCATGCATGTCTTCATCATCGTCTTCGTCTTCAACTCCAACACTTCCATTGAAGAATCTAGCATGCTCAACCACCTCGACCACAACGGCTACCGCAGCAACCTCTTCGTCTTCGTCGTCTGCTTCTTCTTGGGCAGTTCTGAAGCCAGAAGCGGAGGATAATAACAACGGAGAGTGGAACTGCAGTAATAAACAGCAACTTTACATGCAACATCATGATCCACTGGACGCAACGGGAGCGTTGTCCTCAACAGCTTCCATGGAGATTTCACAGCCAAAGTTTCCGGATCAAGATGGATTTGACGGTGTTGTTGGTGAGGTTGATTGCATGGATGATGTGATGGACACTTTTGGGTACATGGAGCTTCTAGAAGCCAACGAGTTCTTTGACCCTTCGTCTATCTTCCAAGGCGAAGAGAATCCCTTAGCGGAATTCACACAAGAGGATCAGGTTTTGCCACAGCAAGAAGAACAACAGAAGCAAGAAAAACCTGCAGTAGTTCATAATCAAAATGATCTTGTTGTTCTTAGACCACAGCAAGAAGCAGTAGTGGAAGGTGTTAGTAACAATAATTATGAACAGCTTCTTGGGTTGTGCGAAGCCAGTAACAATAACGATGTAGAGATCCAAGCAGATGCTGGTGGTGGTGGTGCAATTGCGGATGATGAAATGAGTATGGTGTTCCTGGAATGGCTGAAGTCGAACAAGGATAGCGTATCCGCGAGCGATTTGAGGAGCGTGAAGCTTAAGAAATCCACAATAGAGAGTGCTGCTAAGCGATTGGGCGGTGGAAAAGAAGCTATGAAGCAATTGTTGAAGCTGATTCTTGAATGGGTTCAAACCAGCCACCTTCAGAGTAAAAGGCGCAAGGAAAATAATAACGATAACGCAGTGTCAAACCCTTTCACGGAACAGTTTCAAAATCCAATTCATCAAAACCAGAACAACGCAAATGCTTCGAGTTCTTTTGTCATTGAACCAAACACATGTTTCACCCAGCAGCAACCATGGATGGATCAAGCACCTCTAATGGCAGCCGCTCCTCCGCCTCAGTTTCAGCCTCAGCCGCAATTTCAACAACCCATGGTTGGGTATGTTGGCGACCCTTACACAAACGCTGCTTCTGCAAACACCATGAATGGCAGCAATAATTTTCAGGCTGGTAATGAATACCATATGCTGGAATCGGCGAACTCATGGCCTCCTTCTCAATACACTGTTACTGCTTACTATACCCAGCCATTTGGGGACCATTGTTTTCAACCTCCGGCGGCGGGTGGCTTCGGTAACCAGTACCCTTATCAGTTTTTCCATGGACATGGTGATGGATTGATGAGATTAGGACCCTCAGCTACAAAAGAAGCGAGGAAGAAGCGGATGGCGAGGCAGAGAAGGCTTTCCTCTCATTCTAGGCATCATATTAATCTACAGAGTCAGGGTTCTGATCCAAATGCAAGATTGGGTGTTGGTGGTGAAAATTGCACTGGTGTTGTATCTGCAGCTCCGGCTAATTGGGTGTATTGGCCAACTATGGCTGGTGCTGTTGCTTCCGTTGCGCCCGTGGCTCCCGCGGAACCGTCGGCTGTGGTGGATAAACCTGCCATGCAGACACAGAATTATCATCATCAGGGTCGGCTCTCATCTGATAGGAGACAGGGTTGGAAGTCGGAGAAGAACTTACGATTCCTTTTACAAAAGGTGTTGAAGCAAAGCGATGTTGGAAGTCTGGGAAGAATTGTTCTACCAAAAAAAGAGGCAGAAACACATCTACCAGAACTAGAGGCAAGGGATGGAATCACCATAACAATGGAAGATATTGGCACCTCTCGTGTTTGGAATATGCGCTATAGCATCAGATACTGGCCAAACAATAAAAGCAGGATGTATTTGCTAGAGAACACAGGTGACTTTGTTAAAGCCAATGGACTCCAAGAGGGAGATTTCATAGTGATATATTCAGATGTGAAGTGTGGAAAATTTATGATAAGAGGAGTTAAAGTAAGGCAACAAGAAGGGGCGAAAGCAGAGGGCAAGAAAACAGGAAAATCTCATAAAAAACAGCATGGGAACAATGCGGTGCCTACAGCTGGTGCACCTTATACGAATGCCACGTCATCATCCAGTCAGCAAGAAAATGAAAAAGAGAGTATATAA 2424 0.4526 MECEVGVQGLDLHAKVAKTETVDPILGFGAMNHHHHNNHHHHDAEIYADADDADKDLWLNTTTEQEDLLVGDVKTDASMFYDQFPPLPDFPCMSSSSSSSSTPTLPLKNLACSTTSTTTATAATSSSSSSASSWAVLKPEAEDNNNGEWNCSNKQQLYMQHHDPLDATGALSSTASMEISQPKFPDQDGFDGVVGEVDCMDDVMDTFGYMELLEANEFFDPSSIFQGEENPLAEFTQEDQVLPQQEEQQKQEKPAVVHNQNDLVVLRPQQEAVVEGVSNNNYEQLLGLCEASNNNDVEIQADAGGGGAIADDEMSMVFLEWLKSNKDSVSASDLRSVKLKKSTIESAAKRLGGGKEAMKQLLKLILEWVQTSHLQSKRRKENNNDNAVSNPFTEQFQNPIHQNQNNANASSSFVIEPNTCFTQQQPWMDQAPLMAAAPPPQFQPQPQFQQPMVGYVGDPYTNAASANTMNGSNNFQAGNEYHMLESANSWPPSQYTVTAYYTQPFGDHCFQPPAAGGFGNQYPYQFFHGHGDGLMRLGPSATKEARKKRMARQRRLSSHSRHHINLQSQGSDPNARLGVGGENCTGVVSAAPANWVYWPTMAGAVASVAPVAPAEPSAVVDKPAMQTQNYHHQGRLSSDRRQGWKSEKNLRFLLQKVLKQSDVGSLGRIVLPKKEAETHLPELEARDGITITMEDIGTSRVWNMRYSIRYWPNNKSRMYLLENTGDFVKANGLQEGDFIVIYSDVKCGKFMIRGVKVRQQEGAKAEGKKTGKSHKKQHGNNAVPTAGAPYTNATSSSSQQENEKESI* 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1417 807 MobiDBLite consensus disorder prediction 761 807 - -
Ahy4g1417 807 Pfam B3 DNA binding domain 655 753 IPR003340 GO:0003677
Ahy4g1417 807 SUPERFAMILY DNA-binding pseudobarrel domain 653 752 IPR015300 -
Ahy4g1417 807 CDD BfiI_C_EcoRII_N_B3 652 755 - -
Ahy4g1417 807 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 50 805 IPR044800 GO:0003700
Ahy4g1417 807 MobiDBLite consensus disorder prediction 552 575 - -
Ahy4g1417 807 ProSiteProfiles B3 DNA-binding domain profile. 654 758 IPR003340 GO:0003677
Ahy4g1417 807 SMART B3_2 654 756 IPR003340 GO:0003677
Ahy4g1417 807 MobiDBLite consensus disorder prediction 120 135 - -
Ahy4g1417 807 Gene3D - 644 766 IPR015300 -
Ahy4g1417 807 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 50 805 - -
Ahy4g1417 807 MobiDBLite consensus disorder prediction 777 807 - -
Ahy4g1417 807 MobiDBLite consensus disorder prediction 120 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1417 Ahy-Chr4 71084318 71088721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1417 43 797 B3 DNA Binding Superfamily AT3G24650 42.532 1.91e-152 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Ahy4g1417 B3 9.80E-18 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1417 - - ahf:112742109 1314.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1570 14 75370796 75377584 Ahy4g1417 4 71084318 71088721 hybridization