Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1389 ATGGAATTGATAGAGAAAGTAGTTGTTTATCCCGAGCAATCCACTCTTAATAAGCGAATTTTCTTGTCCAATATCGACTTATGTCTTGTTGTTTACCAAGATAATGTCTTCTTCTTTGATTCTCCAAGTAGCGAAATGAGTTTTTCTGAAATTTTCAATAAATTATGTAATGCATTTGGTAAATTGCTTATGCATTATAACTTTATGGCTGGCCGACATGTGCAAAGTTTGGAGGACAGTCATCGATTTGAAATAGACTGTAATGATGCTGGTATTGTGGTTATTGCTGCAAGAACTAATAGAAAGTTGAGTGAATTTGGTGATATTTTTGCACCTAATCAAGATTTAGAGGAATTGGCTATGTTCCTCCAAGAAGAACAGGAAGAAGAAATCGATTTGAAAGAGAAACTCCTTTTATCGGTACAGTTGACGCAATTTGCTTGCGGGAGTTTGGCACTAACTACTCACTACAATCACTGTACACTAGACGGTTTAGCAGTAAGAGATTTTGGGGCAAACTTGGCTGCATTAACACGTGGTGATTTTCTAATCGTAGTTCCTTTTGCAGATAGGACATTGCTAAGAGCAAGAAACCCACCAAAGATTAGTTACCCACATTTTGAGTATGGAAAAGCTACAAACATTGAAAACTTGTTTAGTGTTCGTGGAACAAGTAGTGGCATTAATGTAAGACAGAATGCAATACAAAACCAAATCCAGATTCTTTATTTGTCTCCACAACAAATTGCCAGCTTTAAAATGAAAGCTATTAAGGATTGTAAATTAAAGAATGTGACTACTTTTCATGTTGTTGCCGGTAAAATATGGAAGGCGAGAACTATTGCGATGAATATGTCAGATGATCAAGTGTCGACAATGTTGTTTCCTGTGGATATTAGGAAAAGAGTTTCTCCAGAACTTTCATACGGCTTTGCAGGCAAGGATGAAATACATATGAGAATATTTTTAACAAAAAAATGTTATGAGTACATAAAAGATAATCATTATATAAAATTTACCAAATCAGCCATTAAGTATTTATGCAATGCTTTGGTTCCTGGATTTGCAAGAGCAACTGTGAAGGAGCTCACAGAATTAGAGGATGCTTATCATATAAAAAAAGTACAAGAAGGAATTGAAAGGTTGGATAATGAGTATATTAAATCAAGCATAGATTGGTTAGAATTGAACAAAGGAGTGCCTCGTAGGGAAGATAGCTTCTCATTGGTTTCAGGGTTGAGATTGGGGCTTGAGGACCAATATTTTGCATGGGGTAAACTAAAATGTTCAACACCACTTACTGTTAAGCCAGGTCTAGTCATGCTATTACCAACAGCACCAGGTGATGGAGGTCTTAATGTCTGTCTGGATTTACCAAAAGATCAAATGTACATATTTCGTAGGATAATGTTGGAATTCTAA 1422 0.3572 MELIEKVVVYPEQSTLNKRIFLSNIDLCLVVYQDNVFFFDSPSSEMSFSEIFNKLCNAFGKLLMHYNFMAGRHVQSLEDSHRFEIDCNDAGIVVIAARTNRKLSEFGDIFAPNQDLEELAMFLQEEQEEEIDLKEKLLLSVQLTQFACGSLALTTHYNHCTLDGLAVRDFGANLAALTRGDFLIVVPFADRTLLRARNPPKISYPHFEYGKATNIENLFSVRGTSSGINVRQNAIQNQIQILYLSPQQIASFKMKAIKDCKLKNVTTFHVVAGKIWKARTIAMNMSDDQVSTMLFPVDIRKRVSPELSYGFAGKDEIHMRIFLTKKCYEYIKDNHYIKFTKSAIKYLCNALVPGFARATVKELTELEDAYHIKKVQEGIERLDNEYIKSSIDWLELNKGVPRREDSFSLVSGLRLGLEDQYFAWGKLKCSTPLTVKPGLVMLLPTAPGDGGLNVCLDLPKDQMYIFRRIMLEF* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1389 473 Gene3D - 231 314 IPR023213 -
Ahy4g1389 473 Gene3D - 341 473 IPR023213 -
Ahy4g1389 473 Pfam Transferase family 2 315 - -
Ahy4g1389 473 Pfam Transferase family 345 467 - -
Ahy4g1389 473 Gene3D - 1 211 IPR023213 -
Ahy4g1389 473 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE-LIKE ISOFORM X1 2 314 - -
Ahy4g1389 473 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE-LIKE ISOFORM X1 345 471 - -
Ahy4g1389 473 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 2 314 - -
Ahy4g1389 473 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 345 471 - -
Ahy4g1389 473 Coils Coil 113 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1389 Ahy-Chr4 66968797 66972234 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1389 5 472 Monolignol Biosynthesis Gene Families AT5G48930 25.367 1.02e-47 168