Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1343 ATGGAAAATAGTTCAGGAATTTCAACAACATTGTTCATCACCTTTTTACTACTAATTCCTTCTTGTTGTGTTATCTTTGTGAATTGCAAAACCCTTGAAAGTTCATCACTATCACTAGATTTGACGATCCCAGACATTTTAGGGTTCTTAGACGAGAGACTAGCTCTTATATTCCCAATAATTCAAGCATTCAAGACCACAATAACTTCTGACCCGTTGGGTATAACCTCAACATGGAGTGGTCCAAACATATGCAACTACACTGGCTTCTACTGCGACAACCCACCGGACAACAAAACCGCCGTAACCGTCGCATCCATAGATTTCAACGGCTTCCAGCTCTCCGCTCCGTCCCTCGACGGCTTCATAGACCAGCTCTCGGACTTGGCAATATTTCACGCCAACTCCAACAACTTCTCTGGCACCATTTCTCCGAACGTAGCAAAACTAAAGTTCCTGTACGAACTGGACTTGAGTAACAACCTCCTCTCCGGCGTGTTCCCCGTTTCCGTTCTCAACATGCCCACATTGTCCTTTCTCGACATAAGGTACAATTTGTTTTCCGGAACAGTGCCACCCAGCATATTTACCCAAGCTTTGGACGTACTTTTTCTGAACAACAACAATTTTGCCCTGACTCTTCCCAACAACTTAGGGGACACAAAGGCTCTCTACCTCACTCTCGCAAACAACAAATTCACCGGCCCCATTCCACGAAGCATCAGAAAAGCCTCGGCCACGCTGACCGAGGTTCTCTTCCTCAACAACCTCCTGACCGGTTGCCTGCCCTATGAGATCGGGTTCTTGAAAAAGGCCACCCTCTTCGACGCCGGAAACAACCTCCTCACAGGGCCGTTGCCGTCCTCCTTGGGCTGCTTGGAGAGCGTGGAGCAGCTAAACCTAGCCAGGAATCAGTTGTACGGACAAATTCCGGAAGTGGTGTGCGCACTTGGTAACTTGGCGAATTTGTCACTGTCCTATAACTACTTCACCAAGGTGGGACCACTGTGCAGGAATATGATTAAGAAGGGTGTTGCTGATGTGAGGAAGAACTGTATTTCGGGGCTTCCGAATCAGAGATCGGCGCAGGAGTGTTTTGCGTTTTTCTTGTCGCGGAGAAGTTGCGGGAACCCGGCGTGGTTTAACTTCTTACCGTGTAAGATTCCGCCGTGGAAGAAACCTAATAGTGAGAGCAATAGTACAGTAACAACGACGACGAAGAGGAATTTGCTTTCATATTCTGCTCCTTTCAGAAATAGATTGCTTTTGTAG 1272 0.4733 MENSSGISTTLFITFLLLIPSCCVIFVNCKTLESSSLSLDLTIPDILGFLDERLALIFPIIQAFKTTITSDPLGITSTWSGPNICNYTGFYCDNPPDNKTAVTVASIDFNGFQLSAPSLDGFIDQLSDLAIFHANSNNFSGTISPNVAKLKFLYELDLSNNLLSGVFPVSVLNMPTLSFLDIRYNLFSGTVPPSIFTQALDVLFLNNNNFALTLPNNLGDTKALYLTLANNKFTGPIPRSIRKASATLTEVLFLNNLLTGCLPYEIGFLKKATLFDAGNNLLTGPLPSSLGCLESVEQLNLARNQLYGQIPEVVCALGNLANLSLSYNYFTKVGPLCRNMIKKGVADVRKNCISGLPNQRSAQECFAFFLSRRSCGNPAWFNFLPCKIPPWKKPNSESNSTVTTTTKRNLLSYSAPFRNRLLL* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1343 423 SUPERFAMILY L domain-like 68 354 - -
Ahy4g1343 423 Gene3D Ribonuclease Inhibitor 249 372 IPR032675 -
Ahy4g1343 423 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 10 416 - -
Ahy4g1343 423 PANTHER SCOPOLETIN GLUCOSYLTRANSFERASE 10 416 - -
Ahy4g1343 423 Gene3D Ribonuclease Inhibitor 199 248 IPR032675 -
Ahy4g1343 423 Gene3D Ribonuclease Inhibitor 60 198 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1343 Ahy-Chr4 56343885 56347155 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1343 40 376 Leucine-rich Repeat extension Gene Families AT3G24480 46.018 1.45e-93 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1343 - - gmx:100813314 576.244