Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1341 ATGGGAAGAGGAACAACAACAACCAACTCCCTGTTCTTTTCGTCACTACTCTTATTACTATTTTCTCTCTTGTTCCAAAACGGCGTCGTTTACGCTCAAGAAAAGATAGCATCGTCAGAGGAAGAAGCATTGGGCTTATTTCAAGAAAGAGAGACACTTGAAATCATCATAGGAGGTGGAAGTACACCTTCCCCTTCACCTTCCCCTGCACCTACTCCACCCGATTATACGCCATGCCCTCCGCCACCGAAACCGCTGAGCCGCTTGGACAAAGCGCGAAAAGTGCTCCTCAACTTCACCAACTACATCGTAGACCCAAATCGTTTCACCAGTAACTGGTGCACGCAGACATTTAACACGTGCAATTTCCACGGAATTCGGTGCGCCACATACCCAGGCTCAAACGAACCTGCAGTTGCAGGGTTAGACCTCAACCAAGCCGGAATCTATGGCCGCAACAACAAACCTCTTTCCCTCTCTGGAATCTTGGACAGAATTCCAGAACTCACATTCTTCCATGTTAACTCCAACAACTTCTCCGGTTCCGTACCAAAGGAAATTATCAGTTACGGCTTTTTCTTCGAGCTTGATCTTAGCAACAACAAGCTTCGTGGTCAGTTTCCAATGGAAACGCTTAAGAACAAGAACCTAGTGTTCTTGGACCTCAGGTTCAACAACCTCACCGGCCCGATTCCATGGCAACTATTCGAAATGGATCTCGACGTGATTTTCATCAACAACAACAAGTTCAACCAGTTCCTCCCCCAGAATTTCGGAAATACCCCCGCAAGGTACCTGACCTTTGCCAACAATCAATTATGCGGTCCCATACCAAGGAGCATCGGCAAGGCAGCCAACACTCTGACGGAGGTGCTCTTCCTTGGGAACAGGTTTGATGGCTGCTTGCCGTACGAAATCGGAAACCTAAAGAAAGCAGTTGTGTTTGATGTGAGCATGAACCAATTAACAGGTCCAATACCGTACTCGTTTGGTTGCTTGAGGCAGATTCAATTCTTGAATCTTGCGAAAAACAAATTCTACGGTGCGGTTCCGGAGAACGTTTGCAAGCTTCCGGGGCTGATTAATAACGGAAACTTGACCCTGTCAAACAACTACTTCACAGAGGTTGGTCCTGAATGCAGGAAATTGATAAAGTCAAGGGTTTTGGATTTGACCAATAACTGTATTCCGGGTTTACCGAACCAGAGGCCGCAAAAAGAGTGTTGGGAGTTTCTTCATAGTGTGAAGCCTTGTCCCAATGAGAAGTATCTTTTGAGTTATGCACCTTGTGCGGGATGGAAGGAAACTGAGAACACGGAGGAGGTGGCAGCGGCGCCGGAGCCTGTTACTTATAACGCGCTCAAACCGCACCGGTTGAGACTTTGA 1386 0.4733 MGRGTTTTNSLFFSSLLLLLFSLLFQNGVVYAQEKIASSEEEALGLFQERETLEIIIGGGSTPSPSPSPAPTPPDYTPCPPPPKPLSRLDKARKVLLNFTNYIVDPNRFTSNWCTQTFNTCNFHGIRCATYPGSNEPAVAGLDLNQAGIYGRNNKPLSLSGILDRIPELTFFHVNSNNFSGSVPKEIISYGFFFELDLSNNKLRGQFPMETLKNKNLVFLDLRFNNLTGPIPWQLFEMDLDVIFINNNKFNQFLPQNFGNTPARYLTFANNQLCGPIPRSIGKAANTLTEVLFLGNRFDGCLPYEIGNLKKAVVFDVSMNQLTGPIPYSFGCLRQIQFLNLAKNKFYGAVPENVCKLPGLINNGNLTLSNNYFTEVGPECRKLIKSRVLDLTNNCIPGLPNQRPQKECWEFLHSVKPCPNEKYLLSYAPCAGWKETENTEEVAAAPEPVTYNALKPHRLRL* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1341 461 SUPERFAMILY L domain-like 92 397 - -
Ahy4g1341 461 Gene3D Ribonuclease Inhibitor 89 263 IPR032675 -
Ahy4g1341 461 Pfam Leucine rich repeat N-terminal domain 91 128 IPR013210 -
Ahy4g1341 461 Gene3D Ribonuclease Inhibitor 264 416 IPR032675 -
Ahy4g1341 461 MobiDBLite consensus disorder prediction 64 84 - -
Ahy4g1341 461 PANTHER BNAC05G26270D PROTEIN 34 447 - -
Ahy4g1341 461 MobiDBLite consensus disorder prediction 57 84 - -
Ahy4g1341 461 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 34 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1341 Ahy-Chr4 55919849 55921905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1341 88 412 Leucine-rich Repeat extension Gene Families AT3G24480 41.896 1.09e-73 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1341 - - gmx:100796207 514.227