Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1312 ATGTCTCTTCCAAGAGCCACAACAGTAGGCAATAATAGTCCAAATAACAGCACTCTTCAACAGCAACTGATGAACAATGAAGGAGGAATAGCAGCAGCACCAACTTCTTCTTCTTCTTGGAATAGGGTTACCAACAACAATAACATCAGAAACTCTGTTAATCCTATACCTCCACAAAAGAGAAGCAAACTTGAAGATAGCGACGAAGATCTGTTCACAGTTCCTGATGTGGAAACCATGCTGAGTGTGCATTCTTCAGCGACAAATACAAATAGTGGTAACGTTGATCAAAGCAACGCAATAGACTCTCAGCTTCAAGCTGCCGTTGCTGGGAAACGCCGCCGTGGAAGAAACCCTGTAGACAAGGAATATAGACGCCTCAAGAGATTATTGAGGAACAGGGTTTCTGCCCAACAAGCACGCGAAAGAAAAAAGGTTTATGTGAATGACTTGGAATCAAGAGCTAAAGACTTGGAAGATAAGAATTCCAACTTGGAAGAGCGCATCTCCACCTTAATCAATGAGAACACCATGCTCCGCAAGGTTCTGATGAATACGAGGCCTAAAGTTGATGAGAATGTTAAAGCATAG 591 0.4264 MSLPRATTVGNNSPNNSTLQQQLMNNEGGIAAAPTSSSSWNRVTNNNNIRNSVNPIPPQKRSKLEDSDEDLFTVPDVETMLSVHSSATNTNSGNVDQSNAIDSQLQAAVAGKRRRGRNPVDKEYRRLKRLLRNRVSAQQARERKKVYVNDLESRAKDLEDKNSNLEERISTLINENTMLRKVLMNTRPKVDENVKA* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1312 196 MobiDBLite consensus disorder prediction 29 58 - -
Ahy4g1312 196 MobiDBLite consensus disorder prediction 1 20 - -
Ahy4g1312 196 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 128 143 IPR004827 GO:0003700|GO:0006355
Ahy4g1312 196 SUPERFAMILY Leucine zipper domain 124 184 IPR046347 GO:0003700|GO:0006355
Ahy4g1312 196 SMART brlzneu 121 185 IPR004827 GO:0003700|GO:0006355
Ahy4g1312 196 MobiDBLite consensus disorder prediction 29 65 - -
Ahy4g1312 196 PANTHER TRANSCRIPTION FACTOR HY5-LIKE 33 194 - -
Ahy4g1312 196 Coils Coil 141 182 - -
Ahy4g1312 196 Pfam bZIP transcription factor 122 181 IPR004827 GO:0003700|GO:0006355
Ahy4g1312 196 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 123 186 IPR004827 GO:0003700|GO:0006355
Ahy4g1312 196 Gene3D Single helix bin 144 185 - -
Ahy4g1312 196 CDD bZIP_HY5-like 135 176 - -
Ahy4g1312 196 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 33 194 IPR044280 GO:0000981|GO:0045944
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1312 Ahy-Chr4 47734485 47766541 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1312 101 193 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT3G17609 73.118 3.08e-42 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ahy4g1312 bZIP_1 8.00E-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1312 K16241 - ahf:112796739 229.18