Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1311 ATGGGAATATATGATCCGTTCCATCAAGTTAGCATGTGGAGTGACAGCTTCAAAGTTGATGGCAGCCTGAATTCAGTTGCTTCCCCAATGTTAATGGTGAACACAAATATGGAGGAAAGTAAGCCTGAGTTTATTCCTCATGAATCAGGGGATCCTTCCGGAGATGATCAAGAGATTACTGATAAAGAAGTCCGTAAGGTGAATCGACGACTGGCACAAAATCGTGAGGCTGCACGGAAAAGCCGGCTGCGGAAGAAGGCTTATGTTCAACAATTAGAAACAAGCAGATTGAAGCTCATGCAATTGGAGCTGGAGATAGAGAAAGCAAGAAAACATGGTCTATATGTAGGGAGTGCATTAGATGATGGTTATACTGGCTCACCGGGAACAATAACCTCAGGGTTAACGGTGTTTGAGATTGAATATGGACACTGGGTTGAACAACAGCATCGGCAGAACGATGAACTCAGAAATGCATTGCACACTCATGCATCTGATATAGAGCTTCATCTACTTGTTGAGAGCAACTTGAATCATTATGCAAATCTTTTCCAGATGAAAGCAGATATGGCAAAGATTGATGTATTTTATTTGATCTCTGGTGCGTGGAAAGCATCGGTTGAACGCCTTTTTCTTTGGATTGGAGGATCCCGTCCATCGCACCTTCTAAATATCATAGTGCCACAACTTGAGCCTTTGAGCGATCAACAAATCGCCAGTATTAACAACCTCCGTCTATCGTCCCAGCAAGCAGAAGATGCGCTTTCACTGGGGTTGGAGAAACTACAGCAGGGTCTGGTCCACAGCATAGCAGTTGATCCAATGCTTATAGGAAACTATGGATTTCAGATGGCTGCCGCCCTTGACAATATTGAGGCTCTAGAAGGTTTTGTGAGCCAGGCAGATCACCTCAGGCAACAAACTCTGCTGCACATGTCTCGAATCTTGACGACCGGCCAAGCCGCTCGAGGTTTGATGATAATGGGAGAATACTTACAACGCCTTCGCACTCTTAGCTCTTTATGGTCATCTCGTCCTTGA 1041 0.4476 MGIYDPFHQVSMWSDSFKVDGSLNSVASPMLMVNTNMEESKPEFIPHESGDPSGDDQEITDKEVRKVNRRLAQNREAARKSRLRKKAYVQQLETSRLKLMQLELEIEKARKHGLYVGSALDDGYTGSPGTITSGLTVFEIEYGHWVEQQHRQNDELRNALHTHASDIELHLLVESNLNHYANLFQMKADMAKIDVFYLISGAWKASVERLFLWIGGSRPSHLLNIIVPQLEPLSDQQIASINNLRLSSQQAEDALSLGLEKLQQGLVHSIAVDPMLIGNYGFQMAAALDNIEALEGFVSQADHLRQQTLLHMSRILTTGQAARGLMIMGEYLQRLRTLSSLWSSRP* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1311 346 SUPERFAMILY Leucine zipper domain 66 100 IPR046347 GO:0003700|GO:0006355
Ahy4g1311 346 ProSiteProfiles DOG1 domain profile. 135 345 IPR025422 GO:0006351|GO:0043565
Ahy4g1311 346 Pfam Seed dormancy control 154 227 IPR025422 GO:0006351|GO:0043565
Ahy4g1311 346 Gene3D - 65 113 - -
Ahy4g1311 346 PANTHER TRANSCRIPTION FACTOR TGA9 1 345 - -
Ahy4g1311 346 Pfam bZIP transcription factor 65 95 IPR004827 GO:0003700|GO:0006355
Ahy4g1311 346 Coils Coil 85 112 - -
Ahy4g1311 346 PANTHER FACTOR TGA7, PUTATIVE-RELATED 1 345 - -
Ahy4g1311 346 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 69 84 IPR004827 GO:0003700|GO:0006355
Ahy4g1311 346 SMART brlzneu 61 122 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1311 Ahy-Chr4 47164049 47172402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1311 1 346 Calmodulin-binding Proteins AT1G77920 54.875 1.80e-133 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ahy4g1311 DOG1 3.20E-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1311 K14431 - gmx:100775882 489.189