Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1292 ATGGAGAGAGAGGACGAAGATGCGACGCAAGAGAGGAGGCTGTTCCGCCGTGCACTGTCGTCGCTCCTGGGGTCGATTGAAGCCGCCGCCGTAGCTAGGGCTTGCCGTGCTCCTGTCCGAAACTTTGAATGTTCCCCTCATGCAGGGAACAATGCTGATCGATTCCTGCATTGGAGCACTAGGTTCCAAATTGTTCTAGGCGTGGAAAGGGGATTGCAGTACCTTCATGAGGATTCACATCTAAGAATTGTTCACCAAGACATCAAAGCAAGCAACATTCTTCTTGATCATAAGTTTCATCCCAAGATTGGAGACTTTGGCCTTGCCAGGTTCTTCCCTGAAGACCAAGCTTATCTTAGCACACAATTCGCTGGAACATTCGCCAAAAGGGCTGTTTTCGCCGGAGCCAGAACATTACCAAAGCTAAAAGTTGCCATCATTGGAGCTGGGCTTTCTGGCATGTCAACTACAGTGAAACTCTTGGATCAAGGACACGAGGCTATTATTGTGTCATGTTGTGGCTGCTTCCATGGCCGTACACTAGCTGTTATATCTATGAGTTGTGACAATGAAGCTACCCGGGGTTCTGGTCCTTTATTGCCTGGCCATCTTAAAGTTGATTTTGGTGATGCAGAAGCCCTTGAAAGAATTTTTAAAGAAAAAGGAGAACACATAGCTGGCTTTCTTTTGGAACCCATCCAGGGTGAAGCTGGGTGGGAAATCCTTGTTGCTTCTTCAAATTCTTTGGCTAAGAAAAAGATAGGTAATCATTCCTCCGGATGGCTATTTGAAAGCTGTTAG 801 0.4682 MEREDEDATQERRLFRRALSSLLGSIEAAAVARACRAPVRNFECSPHAGNNADRFLHWSTRFQIVLGVERGLQYLHEDSHLRIVHQDIKASNILLDHKFHPKIGDFGLARFFPEDQAYLSTQFAGTFAKRAVFAGARTLPKLKVAIIGAGLSGMSTTVKLLDQGHEAIIVSCCGCFHGRTLAVISMSCDNEATRGSGPLLPGHLKVDFGDAEALERIFKEKGEHIAGFLLEPIQGEAGWEILVASSNSLAKKKIGNHSSGWLFESC* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1292 266 SUPERFAMILY PLP-dependent transferases 149 240 IPR015424 -
Ahy4g1292 266 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 54 127 - -
Ahy4g1292 266 Gene3D - 119 251 IPR015421 GO:0003824
Ahy4g1292 266 PANTHER RECEPTOR-LIKE KINASE 54 127 - -
Ahy4g1292 266 Pfam Aminotransferase class-III 141 241 IPR005814 GO:0008483|GO:0030170
Ahy4g1292 266 ProSitePatterns Serine/Threonine protein kinases active-site signature. 83 95 IPR008271 GO:0004672|GO:0006468
Ahy4g1292 266 Pfam Protein kinase domain 63 126 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g1292 266 Gene3D Transferase(Phosphotransferase) domain 1 67 110 - -
Ahy4g1292 266 SUPERFAMILY Protein kinase-like (PK-like) 54 127 IPR011009 -
Ahy4g1292 266 ProSiteProfiles Protein kinase domain profile. 1 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1292 Ahy-Chr4 41843729 41846884 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1292 56 127 Receptor kinase-like Gene Family AT1G70530 59.722 3.32e-25 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy4g1292 Aminotran_3 5.10E-12 CL0061
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1292 K00819 - ahf:112703114 211.46