Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1291 ATGGATGATGAAGTTATTCAGCGAGTGTTCCACGAAGGAGGACGCGATTTCTACCAGCAGCAACCTTCAACTTCCTCCATCCTTCAATCTCTCCCTCTCCATGTGTCTTTTGATCATGGCTATTATTTACTGGTAAAATCTATCCAAGAACTACGTGAGAAAAAGGAAGGCCTTGTTACAGTTGGAATTGGTGGTCCTAGTGGCTCTGGAAAAACAAGCTTAGCAGAAAAGGTGGCATCCGTTATTGGTTGTACTGTTATATCAATGGAGAATTATCGTGATGGAGTTGATGAAGGGGGTGATCTGGATTTTATAGATTTCACGAGCTTGATCAAGAATCTTGAGGATTTGATAAAAGGTGATGATACATTAGTCCCAGTGTTTGATTATCAGCAAAAGAGACGTGTTGGCTATAAAGCTATAAAGAGTACTGCATCTGGGGTGATAATAGTTGATGGAACATATGCATTACATGCAAAACTGCGTTCTTTACTGGATATTCGAGTTGCTGTGGTTGGCGGTGTTCATTTTAGTCTGCTTTCTAAAGTTCGCTATGACATTGGAGATTCTTGTTCACTGGATAGCCTTATAGACAGCATTTTTCCATTATTTAGGAAGCATATTGAGCCAGATCTTCATCATGCACAGATCAGAATTAACAACAGTTTTGTATCATCATTTAGAGAGGCAATCTACAAGGTTAAATGCAGAAGTGAGTCTCCAGAGGGATATTCAAGTACTGCCTTTCAAGGGAATGAAGCCCAAACAGATAATTGTATTGAAATGTACCTTAGACCACCTTCCACTAGTGAAGAAGCAAGGATAAATGATTGGATCAAAGTGCGGCAGTCTGGAATTAGATATTATTTATCACTTGGTGACCAGAGGATTGTTGACAAAAATTTTATTATCAGGCCTAAAGCAGAGTTTGAGGTTGGACGAATGACATTGGGTGGATTGTTGGCTCTTGGATACACAGTTGTCGTTAGTTATAAACGCTCATCCACAACTGTTGATAATGGCAAGGTTTTGGTGTCTTTTGAAACCATTGATGCCCTTGATGAGACATTCATGGTGATGAGAGGAACTAATAGGAAGACTGTTGGAACAGAAGCAATGAGGCTTGGTATCAATGGACCTTGGATTACTAAATCATATCTTGAAATGATCCTTGATAAAAAAGGTGTTCCTCGTCTTAGTACACCACCACTGGTGACTAATACATCTGTGCCTGGAAGTCAAGACACTGCAATCATTGCACCAAAACCAATTCGCGTGACTCCTGACCTTGTTACGGGATTGGAGGATTTGTCTCAGCCATGGACTCGGTCCCCTACAAAATCTAAAATGGAACCTGTTATGGCAACATGGCATTTCATATCTTCGGATTGTTCCCACCCTGACAACTCAGTCCTAGATCCTTCATCTTTCAGGGATACCATTAGGCTTGCTCCAATGCCTGAGTCATGTGACCTGGATAGGGGATTGCTTTTGGCTGTTCAAGCCATACAAGCTTTGTTGGAAAATAAAGGTTTCCCAGTCATAGTTGGAATTGGAGGTCCAAGTGGTTCTGGAAAGACTAGTTTGGCTCATAAAATGGCGAATATTATTGGATGTGAAGTGGTATCCCTGGAAAGCTATTATAAACAAGTAAAGGATTTCAAATATGATGACTTCAGCTCTCTTGACTTATCTTTGCTATCAAAGAATATTAGTGACATAAGAAAAGGCCGAAGAACAAAAGTACCAATATTTGACTTGGAAAGTGGTGCTCGGAGTGGCTTCAAGGAACTTGAAGTTTCAGAAGATTGTGGAGTGATAATTTTTGAAGGTGTCTATGCTTTGCATCCTGATATCCGAGTATCACTTGATTTTTGGATTGCTGTTGTAGGAGGAGTTCATTCACATTTGCTTTCACGAGTTCAAAGGGATAAGAGTAGAGTGGGTTGTTTTATTTCCCAGAATGAGATCATGATGACGGTGTTTCCAATGTTCCAGCAGTACATTGAACCTCATCTCGTTCATGCACACCCTATTAGAGAAGGAAACTTCATCATTCAGCCTAAAGTGGATTTTGATATTGGCATTAGTACAGTTGCTGGTCTTCTTAATCTTGGGTATCAGGCAGTTGCTTACATTGAAGCCTCTGCATTCATCTATCAGGATGGAAAGATTCTAATTGAGGTTGATCATCTACAAGATGTCCCTGGCCCATATATTCAGATCAAGGGTGTTAATAAAGATGCAGTGGCAGCAGCGGGTTCAATGCTTGAATTGGATGGCTCATATACAACTAAGAGTTATCTTGAAATAATTTTAGAAAGACTACCAACAATAGAAAGAACTTCTGGTGGGATTAACTCTCAGCAATCAGCAAGGCTGCTAGAGATTATTGAATTTATTCAATCTCAGTTTTGTTGGAATGATCAGGGGTGCAGCTCTCCTTCAGAATCATCACCAAGTAGGGGAGTCTCTCCAATTGAAGGGGCTATTGAGGAGATGCAATCAAGGATTAGAAGGCTTGAGAAGTGGCTTGCTATAAATACGGTTCTATGGACATTTCTAATGTCTGCCCTTGTTGGTTTTTCACTGTATCAAAGGAGGCGTCAGTGA 2613 0.4041 MDDEVIQRVFHEGGRDFYQQQPSTSSILQSLPLHVSFDHGYYLLVKSIQELREKKEGLVTVGIGGPSGSGKTSLAEKVASVIGCTVISMENYRDGVDEGGDLDFIDFTSLIKNLEDLIKGDDTLVPVFDYQQKRRVGYKAIKSTASGVIIVDGTYALHAKLRSLLDIRVAVVGGVHFSLLSKVRYDIGDSCSLDSLIDSIFPLFRKHIEPDLHHAQIRINNSFVSSFREAIYKVKCRSESPEGYSSTAFQGNEAQTDNCIEMYLRPPSTSEEARINDWIKVRQSGIRYYLSLGDQRIVDKNFIIRPKAEFEVGRMTLGGLLALGYTVVVSYKRSSTTVDNGKVLVSFETIDALDETFMVMRGTNRKTVGTEAMRLGINGPWITKSYLEMILDKKGVPRLSTPPLVTNTSVPGSQDTAIIAPKPIRVTPDLVTGLEDLSQPWTRSPTKSKMEPVMATWHFISSDCSHPDNSVLDPSSFRDTIRLAPMPESCDLDRGLLLAVQAIQALLENKGFPVIVGIGGPSGSGKTSLAHKMANIIGCEVVSLESYYKQVKDFKYDDFSSLDLSLLSKNISDIRKGRRTKVPIFDLESGARSGFKELEVSEDCGVIIFEGVYALHPDIRVSLDFWIAVVGGVHSHLLSRVQRDKSRVGCFISQNEIMMTVFPMFQQYIEPHLVHAHPIREGNFIIQPKVDFDIGISTVAGLLNLGYQAVAYIEASAFIYQDGKILIEVDHLQDVPGPYIQIKGVNKDAVAAAGSMLELDGSYTTKSYLEIILERLPTIERTSGGINSQQSARLLEIIEFIQSQFCWNDQGCSSPSESSPSRGVSPIEGAIEEMQSRIRRLEKWLAINTVLWTFLMSALVGFSLYQRRRQ* 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1291 870 Pfam Phosphoribulokinase / Uridine kinase family 515 677 IPR006083 GO:0005524|GO:0016301
Ahy4g1291 870 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 171 IPR027417 -
Ahy4g1291 870 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 682 861 - -
Ahy4g1291 870 PRINTS Uridine kinase signature 634 644 - -
Ahy4g1291 870 PRINTS Uridine kinase signature 540 551 - -
Ahy4g1291 870 PRINTS Uridine kinase signature 513 530 - -
Ahy4g1291 870 PANTHER URIDINE KINASE 486 600 - -
Ahy4g1291 870 SMART AAA_5 57 207 IPR003593 -
Ahy4g1291 870 SMART AAA_5 512 656 IPR003593 -
Ahy4g1291 870 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 507 679 IPR027417 -
Ahy4g1291 870 CDD UMPK_like 515 677 - -
Ahy4g1291 870 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 600 680 - -
Ahy4g1291 870 Gene3D - 512 687 IPR027417 -
Ahy4g1291 870 Gene3D - 59 238 IPR027417 -
Ahy4g1291 870 PANTHER URIDINE KINASE 2 416 - -
Ahy4g1291 870 PANTHER URIDINE KINASE 600 680 - -
Ahy4g1291 870 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 2 416 - -
Ahy4g1291 870 CDD UMPK_like 60 222 - -
Ahy4g1291 870 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 486 600 - -
Ahy4g1291 870 PANTHER URIDINE KINASE 682 861 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1291 Ahy-Chr4 40705413 40719178 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1291 508 671 PRT Gene Family AT1G55810 26.404 6.30e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1291 - - gmx:100778905 1173.3