Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1287 ATGGAAATCAGTGGCACCCACAATGGGAGTAGCATGATGTGGTTCTTCAAGGATCGAGGGTTTGATGATAACAGCATACATGGAATCTTCAGAAAGTGCAAACGCCTAGAGAGTGTTCAGAAAGAGAGAGCAAAGGAGAATTGGGAATACTTGAGAGCCATTGGAATTCAAGAGAGGAAGATTCCTTCCATTGTTTCGAAATGCCCCAAGATCCTGGCCCTGGACCTCAACGAGAAGATTGTCCCCATGGTTGAGTGTCTCAGGACACTAGGAACAAAACCCCATGAAGTCACCTCTGCCATTGCCAAGTTCCCTCACATACTCTCGCACAGCGTCGAAGAGAAGCTCTGTCCCCTCTTGGCATTCTTTCAGGCATTAGGCATACCTGAGAAGCAAATTGGGAAAGTGATACTGATCAACCCTCGGCTTATCAGCTACAGCATCGAAACAAAGTTGAAAGAGATTGTGGACTTCCTTGTTAGCCTTGGTCTTGATAAAGATGGAATGATTGGAAAAGTCATAATGAAGTTCCCGTTTATAATGGGTTATAGTGTTAACAAGAGGCTCCGGCCGACTTCAGAGTTTCTGAGGTCGATAGGCCTAAGTGAGTTAGATCTTCAGGCTGTAGCTATGAACTTCCCTGCAATCTTAAGTAGAGATGCAAAAAAGGCTTTGGTGCCCAATTATGATTTCTTAAAGAAATGTGGATTTCAAGACCCACAAATATCTGCTTTGGTTGTTGGTTTTCCTCCTATCTTGATCAAGAGCATACAGAATTCTTTAGAGCCAAGGATTAGGTTTTTAGTGGACGTGATGGGGAGACAAGTCGATGAAGTCATTGATTATCCTTGCTTCTTTCGTCATGGCCTCAAAAGAAGGTTAGAGTCGCGGCACAAACTTCTAAAGCAGCGGAACCTAGATTGTAGCTTGAGTGAAATGCTGGCCTATAATCAGAAGAAGTTCAACATGAAGTTTGGCTTGTTAGAATTGAGTAACTAA 999 0.4334 MEISGTHNGSSMMWFFKDRGFDDNSIHGIFRKCKRLESVQKERAKENWEYLRAIGIQERKIPSIVSKCPKILALDLNEKIVPMVECLRTLGTKPHEVTSAIAKFPHILSHSVEEKLCPLLAFFQALGIPEKQIGKVILINPRLISYSIETKLKEIVDFLVSLGLDKDGMIGKVIMKFPFIMGYSVNKRLRPTSEFLRSIGLSELDLQAVAMNFPAILSRDAKKALVPNYDFLKKCGFQDPQISALVVGFPPILIKSIQNSLEPRIRFLVDVMGRQVDEVIDYPCFFRHGLKRRLESRHKLLKQRNLDCSLSEMLAYNQKKFNMKFGLLELSN* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1287 332 Gene3D Transcription termination factor 3, mitochondrial 104 331 IPR038538 -
Ahy4g1287 332 SMART mt_12 276 307 IPR003690 GO:0003690|GO:0006355
Ahy4g1287 332 SMART mt_12 98 129 IPR003690 GO:0003690|GO:0006355
Ahy4g1287 332 SMART mt_12 134 165 IPR003690 GO:0003690|GO:0006355
Ahy4g1287 332 SMART mt_12 171 202 IPR003690 GO:0003690|GO:0006355
Ahy4g1287 332 SMART mt_12 207 238 IPR003690 GO:0003690|GO:0006355
Ahy4g1287 332 SMART mt_12 62 93 IPR003690 GO:0003690|GO:0006355
Ahy4g1287 332 SMART mt_12 243 275 IPR003690 GO:0003690|GO:0006355
Ahy4g1287 332 Pfam mTERF 15 124 IPR003690 GO:0003690|GO:0006355
Ahy4g1287 332 Pfam mTERF 101 321 IPR003690 GO:0003690|GO:0006355
Ahy4g1287 332 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF6, CHLOROPLASTIC/MITOCHONDRIAL 11 328 - -
Ahy4g1287 332 PANTHER CGI-12 PROTEIN-RELATED 11 328 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1287 Ahy-Chr4 40291384 40293757 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Ahy4g1287 mTERF 2.10E-47 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1287 K15032 - gmx:100816929 543.117