Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1277 ATGGAGAACATTCTGGGTCTCATCAAATTACGCATCAAAAGAGGCACTAACCTCAAACCTTGTGATAGTGATTCCAGTGACCCTTATGTCCTTGTCACCTTGGAGGAAACGAAACTGAAAACTCGTCATGAGAAAGATAGCTTGAATCCGGAGTGGAATGAAGAATTGACACTCTATATTAAGGATGTTAATATTCCCATTCATCTTACGGTTTGTGACAAAGACACTTTCACGAAGGACGACAAGATGGGCGAAGCGGATATCGACTTGAAGCCATATCTTCTGTGTGTGAAGGTGGGATTAAGCGAGCTGCCAGAGGGCCATGTGGTGAAGAGGATTGAACCAAATGACTCTAACTGCCTTGCTGAAGAGAGCAAGATCATATGGACTAATGGGAAAGTAATCCAATATATGACCTTAAAATTGAGAAATGTTAACACTGGTGAGCTTCATGTGGAAATTGAGTGGCTTGATGTTCCTGAATCCAAGGGCTTATCTGGGGTTCCACTTTAG 513 0.425 MENILGLIKLRIKRGTNLKPCDSDSSDPYVLVTLEETKLKTRHEKDSLNPEWNEELTLYIKDVNIPIHLTVCDKDTFTKDDKMGEADIDLKPYLLCVKVGLSELPEGHVVKRIEPNDSNCLAEESKIIWTNGKVIQYMTLKLRNVNTGELHVEIEWLDVPESKGLSGVPL* 171
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1277 170 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Ahy4g1277 170 Gene3D C2 domain 5 165 IPR035892 -
Ahy4g1277 170 Pfam C2 domain 7 92 IPR000008 -
Ahy4g1277 170 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 167 - -
Ahy4g1277 170 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 167 IPR044562 -
Ahy4g1277 170 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 158 IPR035892 -
Ahy4g1277 170 SMART C2_3c 7 102 IPR000008 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ahy4g1277 Ahy-Chr4 38816935 38818695 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1277 38 166 C2H2 Transcription Factor Family AT1G70790 54.198 1.40e-45 145