Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1235 ATGAAGCTCTCCTTCTCGATCCCCTCGAAGTCCTCTTCCTCCTCTAAACCCATCAAACTCGACGACTCCTCCAAAAACGGCGCGGCACCCTCCAAGCACTTCGTCACCGAATTCGACCCTTCCAAACCGCCAACCGAACAAACCGCCACCGTTATACCCCCGATCCAGAACGAATGGCGCCCCACCAAGAAGATGAAGAACCTCGAGCTTCCCATCACTGACCCCAACGCTGACCATCAATCCCTCGAATTCGAGAACGATTCCAATGCCGCGGATGCAGAACTCGGCACAGACATGTCCTACGGTCTCAACCTGCGCCAAGACGCCGAGAAAAATGGCAAAACCGGTAAACTCGCTGATGATGAGGATGATAGGGTTCCGCGTCAAAGGCCGGAGATGGCGTTACTGCAGAAGTTTAAGGACGACTTGAAGCGGCTGCCTGATCACCAGGGGCTCGAGGAGTTCAATGATGTACCTGTTGAGGGTTTCGGCAAGGCCTTGCTGGCCGGATATGGGTGGTCAGAAGGAATGGGAATAGGGAGGAATGCCAAGGAGGACGTTAAGGTTGTGGAGTACAAGAGGAGGACTGCCAAGGAAGGGTTAGGATTTGTTGGCGATGATCGCAGTTCTGTTCGGAGCCAGAAGAAGAAAAGCAGGGAAGACAATGGGAGCAATGATGCAGGTTTTGTTAATGAGAAGAAGATTGTGAGGATTATTGGGGGAAAAGATGCTGGATTGAAGGGTATTGTTGTGAGGAGAATTGGGGAGGATTGGATTGTTTTGAAGGTTTCAAGGAGTGGGGAGGAAGTGGAGTCTAGAGTGAGTGTGGATGATGTTGCTGAACTGGGATCTGCTGAGGAAGAGACGTGCTTAAGGAAATTGAAGGAGCTGAGGATTCGGCACAAGGGTGAAGATGACAAGACTTCAAGGCATAAGCGTGAGAGAGAGCGAGGCCGGGTTGAGAAGACAACTCGAGCGGAAGCTAATGGGGGTGATCAGCAGCGGGGTAGGAAACAGGTTTCTTGGCTCACAAGTCACATTAGAGTTAGGGTTATTAGCCAGAACATTAAAGGAGGGCGGTTGTATTTGAAAAAGGCACAGGTTTTGGATGTTGTTGGGCCTTTGACTTGTGATATATCTATGGATGAGAGCAAAGAGATTGTTCAAGGAGTGTCCCAAGATATGCTGGAGACCGCGCTTCCTCGACGTGGGGGACCAGTTCTTGTGCTATCTGGTAAATATAAGGGCGCCTTTGGGAGCCTGCTTGAGAGGGATTTGACTCGGGAAGTTGGTGTTGTTCGGGATGCTGATACTCATCAGCTGCTCAATGTGAAGCTTGAACAGATTGCAGAGTATATAGGGGATCCTAGCTTATTAGGGCATTGA 1386 0.5043 MKLSFSIPSKSSSSSKPIKLDDSSKNGAAPSKHFVTEFDPSKPPTEQTATVIPPIQNEWRPTKKMKNLELPITDPNADHQSLEFENDSNAADAELGTDMSYGLNLRQDAEKNGKTGKLADDEDDRVPRQRPEMALLQKFKDDLKRLPDHQGLEEFNDVPVEGFGKALLAGYGWSEGMGIGRNAKEDVKVVEYKRRTAKEGLGFVGDDRSSVRSQKKKSREDNGSNDAGFVNEKKIVRIIGGKDAGLKGIVVRRIGEDWIVLKVSRSGEEVESRVSVDDVAELGSAEEETCLRKLKELRIRHKGEDDKTSRHKRERERGRVEKTTRAEANGGDQQRGRKQVSWLTSHIRVRVISQNIKGGRLYLKKAQVLDVVGPLTCDISMDESKEIVQGVSQDMLETALPRRGGPVLVLSGKYKGAFGSLLERDLTREVGVVRDADTHQLLNVKLEQIAEYIGDPSLLGH* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1235 461 MobiDBLite consensus disorder prediction 1 62 - -
Ahy4g1235 461 MobiDBLite consensus disorder prediction 41 55 - -
Ahy4g1235 461 SMART kow_9 229 256 IPR005824 -
Ahy4g1235 461 SMART kow_9 400 427 IPR005824 -
Ahy4g1235 461 SMART G-patch_5 158 204 IPR000467 GO:0003676
Ahy4g1235 461 MobiDBLite consensus disorder prediction 303 337 - -
Ahy4g1235 461 MobiDBLite consensus disorder prediction 303 332 - -
Ahy4g1235 461 ProSiteProfiles G-patch domain profile. 160 206 IPR000467 GO:0003676
Ahy4g1235 461 PANTHER G PATCH AND KOW-CONTAINING 1 459 IPR045166 GO:0000398
Ahy4g1235 461 MobiDBLite consensus disorder prediction 110 131 - -
Ahy4g1235 461 MobiDBLite consensus disorder prediction 1 21 - -
Ahy4g1235 461 MobiDBLite consensus disorder prediction 209 226 - -
Ahy4g1235 461 Gene3D - 346 400 - -
Ahy4g1235 461 MobiDBLite consensus disorder prediction 203 226 - -
Ahy4g1235 461 MobiDBLite consensus disorder prediction 108 131 - -
Ahy4g1235 461 Pfam G-patch domain 147 204 IPR026822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1235 Ahy-Chr4 36760620 36762224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1235 304 422 C2H2 Transcription Factor Family AT1G55460 32.031 4.39e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1235 K13101 - gmx:100784983 486.878