Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1231 ATGATGATGATCATGGTCATGACCTCCAAAATCAACTTTAGATGTCACTTTAATTTAGAAGACATGGAAGACAGCAGCAGCAATGGTGGTAGCGGGAAACGTGAGGAAATTGTGGACGTTGGGTCGGTCGTTGAAGCTGTTACTGTAGAGGAAGGTGATGCTCCCCTCTACAACGTTGAGAGCCTCTGCATGCGTTGCGGTGAAAATGGGATTACAAGATTCTTACTCACCTTAATTCCTCACTTCAGAAAGATTTTGTTGTCAGCTTTTGAGTGTCCTCATTGTGGTGAGAGGAACAATGAAGTACAGTTTGCTGGAGAAATTCAACCGCGTGGTTGCTGTTACACTCTGCAGATCCCATCTGACAATCCAAAGATGCTTGACAGACAAGTGGTAAAATCAGAATCTGCTACCATTAAGATTCCAGAATTGGATTTTGAGATTCCACCAGAGGCTCAGCGTGGTAGTCTTTCAACGGTGGAAGGCATACTAATGCGAGCTGCTGATGAGCTTCAGGCCCTTCAAGAGGAGCGCAGGAAAGTGTCTCCAGAGACAGCTGAAGCCATTGATCAGTTCTTGGTGAAATTGCGAGCCTGTGCTACTGGAGAGTCAGCCTTCACATTTATTCTTGATGATCCTGCTGGAAACAGCTTTGTTGAAAATCCGTTTGCGCCATCATCTGATCCATCATTGACTATCAAGTTTTATGACCGAACACCTGAGCAACAAGCATTGTTGGGATATCTTGTTGATTCTACACAGATTGAAGGAACTCGCAACGAAGCACAAGCAGGGGGAAATGCTGTGGTTACTGAACAAGTGAGGGGAGAGCCACATGGATCTGTAGGGGCAACTGCTGGTCATCGAGCCATTGCACAGAGTAATAGTTCAGAAATTGCGGAAGCCTTATTTCGATACACTGCACCGGAAGAGGTGATGACTTTCCCTTCAACTTGTGGTGCATGTGCCACTAAGTGTGAGACTAGAATGTTTGTCACCAATATTCCATACTTTCAAGAAGTAATCGTAATGGCATCCACATGTGACTCTTGTGGCTACCGCAACTCCGAGTTAAAACCAGGTGGACGAATTTCTGAAAAAGGCAAAAGAATTTCACTTCATGTGAAAAATGTTAACGACTTAAATCGCGATGTAATCAAGTCTGATACTGCAAGTGTAAAAATTCCTGAACTTGAATTGGAATTGGCAAGTGGCACCCTTGGTGGTTTGGTTTCAACTGTTGAAGGTTTGATTACAAAAATTAACGAAAGCCTTCAGAGGGTCCATGGATTTACTTTCGGTGATAGTTTGGATGAAAATAGAAAAAGCAAGTGGCTAGATTTTAAAGAAAAGCTAGACAAGCTTCTTAGCTTGGAAAAACCTTGGACTTTAATTCTTGATGATGCATTAGCCAATTCCTTTATAGCACCTGCAACTGATGATTTAAAAGACGACAATCAATTAACGTTTGAGGAGTATGAGAGGTCATGGGAGCAAAATGAAGAATTAGGCTTGAATGATATGGATACTTCTGCTGCCGATGTTGCTTACGAATCAGCAAATAATACTAAAGTTGAATGA 1581 0.425 MMMIMVMTSKINFRCHFNLEDMEDSSSNGGSGKREEIVDVGSVVEAVTVEEGDAPLYNVESLCMRCGENGITRFLLTLIPHFRKILLSAFECPHCGERNNEVQFAGEIQPRGCCYTLQIPSDNPKMLDRQVVKSESATIKIPELDFEIPPEAQRGSLSTVEGILMRAADELQALQEERRKVSPETAEAIDQFLVKLRACATGESAFTFILDDPAGNSFVENPFAPSSDPSLTIKFYDRTPEQQALLGYLVDSTQIEGTRNEAQAGGNAVVTEQVRGEPHGSVGATAGHRAIAQSNSSEIAEALFRYTAPEEVMTFPSTCGACATKCETRMFVTNIPYFQEVIVMASTCDSCGYRNSELKPGGRISEKGKRISLHVKNVNDLNRDVIKSDTASVKIPELELELASGTLGGLVSTVEGLITKINESLQRVHGFTFGDSLDENRKSKWLDFKEKLDKLLSLEKPWTLILDDALANSFIAPATDDLKDDNQLTFEEYERSWEQNEELGLNDMDTSAADVAYESANNTKVE* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1231 526 Gene3D ZPR1, zinc finger domain 53 106 IPR042452 -
Ahy4g1231 526 Gene3D ZPR1, zinc finger domain 307 362 IPR042452 -
Ahy4g1231 526 PANTHER ZINC FINGER PROTEIN ZPR1-RELATED 36 519 - -
Ahy4g1231 526 SMART zpr1 317 477 IPR004457 GO:0008270
Ahy4g1231 526 SMART zpr1 61 221 IPR004457 GO:0008270
Ahy4g1231 526 PANTHER ZINC FINGER PROTEIN ZPR1 36 519 IPR040141 -
Ahy4g1231 526 Gene3D ZPR1, A/B domain 107 248 IPR042451 -
Ahy4g1231 526 Gene3D ZPR1, A/B domain 363 505 IPR042451 -
Ahy4g1231 526 Pfam ZPR1 zinc-finger domain 317 475 IPR004457 GO:0008270
Ahy4g1231 526 Pfam ZPR1 zinc-finger domain 61 220 IPR004457 GO:0008270
Ahy4g1231 526 Coils Coil 157 177 - -
Ahy4g1231 526 TIGRFAM ZPR1_znf: ZPR1 zinc finger domain 63 243 IPR004457 GO:0008270
Ahy4g1231 526 TIGRFAM ZPR1_znf: ZPR1 zinc finger domain 318 509 IPR004457 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1231 Ahy-Chr4 36605569 36615766 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1231 33 525 C2H2 Transcription Factor Family AT5G22480 74.494 0.0 770