Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1211 ATGAAAGAGGGTGGTAGGAAGCAGGGTTCAGCCTCACCTTGTGCTGCATGCAAGCTTCTCCGCCGAAGGTGCGCCGCGGATTGCGTCTTTGCGCCGTATTTCCCGGCCGACGAGCCTCACAAGTTTGCAAATGTGCATAAGGTCTTTGGTGCCAGCAATGTCAACAAGATGCTTCAGGAGCTACCAGAGCATCAGAGAGGAGATGCAGTGAGCAGCATGGTGTATGAGGCAAATGCAAGAGTGAGGGACCCTGTTTATGGCTGTGTGGGAGCCATCTCTTCTCTTCAACAACAAATTGATGCGTTGCAAATCCAATTGGCTGTGGCTCAGGCTGAGGCTGTGCATCTCAGGGTGCGCCAGACCCAGACTGCATCCTGCTCTTACTGGACCCAACCCCATAGCCCAACCAATAGTGCCTCCCCATCCTCCAAGCCCATTTTTGACATCGACATGGGCCTTGACCATACCTCTTATGCAGATTCTATGTGGTCATGA 495 0.5293 MKEGGRKQGSASPCAACKLLRRRCAADCVFAPYFPADEPHKFANVHKVFGASNVNKMLQELPEHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDALQIQLAVAQAEAVHLRVRQTQTASCSYWTQPHSPTNSASPSSKPIFDIDMGLDHTSYADSMWS* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1211 164 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Ahy4g1211 164 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
Ahy4g1211 164 Coils Coil 92 119 - -
Ahy4g1211 164 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 1 138 - -
Ahy4g1211 164 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1211 Ahy-Chr4 33988542 33992955 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1211 1 164 AS2 family AT1G31320 69.591 2.58e-71 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy4g1211 LOB 1.50E-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1211 - - gmx:100802822 231.876