Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1202 ATGATGAAGCTGCGAATGGGAACGGGTGTCATCGTCATTTCCACAGCGTTGTTATTTTTATGCCTCCCATTTTGTTCGTCTTCAGTTCCCAATGACCCCTTCTTCGGAATCGCTCCCCAAGATGAGAAATATTACAAGTCTTCGGATGTAATAAGATGCAAAGATGGATCGGGAAAATTCACCAGAGCACAGCTCAATGACGATTTCTGCGACTGCCCCGATGGCACCGATGAGCCTGGTACATCAGCATGTCCCGGTGGAAAATTTTACTGTCATAATGCAGGGCATGTCCCTACTTCCCTGTTTTCGTCTAGGGTGAACGATGGAATTTGCGATTGCTGTGATGGAACTGATGAATATGATGGCAAAGTAACATGCTCAAATACCTGCTGGGAAGCTGGGAAAGTTGCTCGCGATAAGCTGAAAAAGAAGATTGCCACATATCAAGATGGTGTCAAGCTCCGGAAGGATGAAATTGAAAAAGCAAAATCAGCTCTAGATAAGGACAAGGCTGAACTTTTAAAACTGAAAAAAGAAGAAAGCACACTTAAAGAGATTGTGCAACAGCTAAAAGAGCATAAAGAAGAAATAGAGAAGGAAGAAGAGAAGGAGCGCTTACGGAAGGAAAAAGAAGAGAAAGAGAAAAAGGAGGCTGAGGAGAAGGCTAATGAAGAAAAATCTGCAGCTACTGGAGAAGAAGCACGGCATACAAATGAAGCAGGAAAGCATTCAGATGCCAAAGACTATGCTGCGGGTGAAACGAAGTATGAGCAATCAGATGTAGGTGATAGTTATGATGGAGCCACAGATAGTCCTAGTAGTGAAGGATCTCTGCTTAATGAAGTGGAGGAGAGTGTAAAGGGTGCTGAGGGAGAACATGCTGCTAAATCAGAAACTGATTTGAGGGTTGAAGAGAAAAAGTCTTCTGAGGAAATAATCAATACGGGAAATGATGCATCTGAAAATACTGAGGGATTATCAAAGGAAGAATTGGGACAGCTTGTTGCTTCTCGTTGGACAGGACAAAAGGGGGGTAAGCAAAGTGGTGAAGCTGAAGATGCAAAGAAAACTGAAGAACAGGAAGATCTCACAAGCGAGTCCAATAACGAGGAGTATGAAGGCTATGCTTCTGAAACTGACGATGACAGCAACAGATATGATGGAGAAGATGAAACCGAAGACGATTTTAGAGAGGAAGAGCGTGATGATGTCAGTTCCTCTTACAAACCTGACACAGATTTTGAAGGTGAACCAGACTTGTCAGATAATCCTTCTTGGTTAACAAAAATACAGAGAACTGTGCGGAAACTTTTTAAGGCTGTTAATTTCTTCGAGACTCCATTGAACCAGACAGATGCTGCTCGTGTACGAAAAGAATACGATGAGTTGAGTTCCAAGTTGTCAAAATTACAGTCAAGAGTATCAAGTCTGACACAAAAGTTAAAACATGATTTTGGTCCAGAGAGCGAGTTCTATTCATTCTATGACCGATGCTTTGAGAGTAAACAGAACAAGTACACTTACAAAGTCTGCCCTTATGATCAGGCTTCTCAGGAGGAGGGCTATTCAACTACCCGTTTGGGCCGCTGGGACAAATTTGAGGACTCCTATAAAGTAATGGCATTTTCCAATGGTGATAGATGCTGGAATGGTCCTGATAGAAGCATGAAGGTTAGGATGAGATGCGGGCTGAAAAATGAGATTACAGATGTGGATGAACCAAGCCGATGCGAATATGTAGCTTTGTTATCTACCCCAGCTCTTTGTAAAGAGGAAAAGTTGAAGGAATTACAACACAAGTTAGACTCCCTGAATTCGCAACAACCCGAAAAACACGACGAATTATGA 1848 0.4242 MMKLRMGTGVIVISTALLFLCLPFCSSSVPNDPFFGIAPQDEKYYKSSDVIRCKDGSGKFTRAQLNDDFCDCPDGTDEPGTSACPGGKFYCHNAGHVPTSLFSSRVNDGICDCCDGTDEYDGKVTCSNTCWEAGKVARDKLKKKIATYQDGVKLRKDEIEKAKSALDKDKAELLKLKKEESTLKEIVQQLKEHKEEIEKEEEKERLRKEKEEKEKKEAEEKANEEKSAATGEEARHTNEAGKHSDAKDYAAGETKYEQSDVGDSYDGATDSPSSEGSLLNEVEESVKGAEGEHAAKSETDLRVEEKKSSEEIINTGNDASENTEGLSKEELGQLVASRWTGQKGGKQSGEAEDAKKTEEQEDLTSESNNEEYEGYASETDDDSNRYDGEDETEDDFREEERDDVSSSYKPDTDFEGEPDLSDNPSWLTKIQRTVRKLFKAVNFFETPLNQTDAARVRKEYDELSSKLSKLQSRVSSLTQKLKHDFGPESEFYSFYDRCFESKQNKYTYKVCPYDQASQEEGYSTTRLGRWDKFEDSYKVMAFSNGDRCWNGPDRSMKVRMRCGLKNEITDVDEPSRCEYVALLSTPALCKEEKLKELQHKLDSLNSQQPEKHDEL* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1202 615 Pfam Glucosidase II beta subunit-like 32 179 IPR028146 -
Ahy4g1202 615 ProSiteProfiles MRH domain profile. 496 591 IPR044865 -
Ahy4g1202 615 SUPERFAMILY Mannose 6-phosphate receptor domain 498 589 IPR009011 -
Ahy4g1202 615 Coils Coil 453 480 - -
Ahy4g1202 615 MobiDBLite consensus disorder prediction 348 363 - -
Ahy4g1202 615 MobiDBLite consensus disorder prediction 285 312 - -
Ahy4g1202 615 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 24 615 IPR039794 -
Ahy4g1202 615 Coils Coil 156 235 - -
Ahy4g1202 615 PANTHER BNACNNG14010D PROTEIN 24 615 - -
Ahy4g1202 615 MobiDBLite consensus disorder prediction 264 280 - -
Ahy4g1202 615 MobiDBLite consensus disorder prediction 193 424 - -
Ahy4g1202 615 MobiDBLite consensus disorder prediction 401 416 - -
Ahy4g1202 615 MobiDBLite consensus disorder prediction 193 254 - -
Ahy4g1202 615 Gene3D - 491 589 IPR009011 -
Ahy4g1202 615 Coils Coil 587 607 - -
Ahy4g1202 615 Pfam Glucosidase II beta subunit-like protein 457 611 IPR036607 -
Ahy4g1202 615 MobiDBLite consensus disorder prediction 364 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1202 Ahy-Chr4 33603881 33612398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1202 26 615 Calmodulin-binding Proteins AT5G56360 53.920 0.0 600