LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy4g1181	ATGAGGTTGGTGGAGTTTTGGTGTATATTTATAATAATTATATTGGCCAATATTCTTGAACCTGGGAAGGCAGAGGTTTATATAGTAACCGTTGAAGGTGAGCCCATCATAAGTTACACCGGCGGTATCGATGGGTTTGAAGCTACTGCTGTGGAATCTGATGAGAAGATCGATACCACAAGTGAATTGGTCACTTCTTATGCACGCCACCTTGAGAAAAGACATGATATGCTACTTGAAATGTTGTTTGATACTGGGACGTACACAAAACTCTATAGCTATCGACATCTTATAAATGGGTTTGCTGTGCATCTTTCCCCAGAGCAGGCAGAAACTCTTAGACATGCTCCTGGTGTTAAATCTGTTGTGAGGGACTGGAAAGTGAAGAGACTTACAACACATACCCCACAATTTTTGGGGCTTCCAACTGGAGTGTGGCCGACAGGAGGTGGCTATGATCGAGCCGGAGAAAACATAGTGATCGGATTTGTGGACTCTGGGATATATCCTCACCATCCCAGCTTTGTCACTTATAATACTGAACCATATGGGCCACTTCCAACGTATAGAGGAAAATGTGAAGTTGACCCGGAGACTAAGAGAAGTTTCTGTAATGGGAAGATTATAGGAGCACAGCATTTTGCTCAAGCTGCAATAGCTGCTGGGGCATTTAACCCTATAGTTGATTTTGCTTCTCCTTTGGACGGGGATGGGCATGGAAGTCATACTGCCTCTATTGCGGCTGGAAGAAATGGAATTCCTGTGAGGATGCATGGACATGAATTTGGGAAAGCAAGTGGAATGGCTCCTCGTGCCAGGATTGCTGTGTACAAAGCACTCTATAGACTCTTTGGAGGTTTCATTGCAGATGTAGTTGCTGCAATTGATCAGGCTGTACATGATGGGGTGGATATACTCAGCCTTTCTGTTGGACCCAACAGTCCTCCAGCAACCACCAAAACCACTTATTTAAACCCATTTGATGCTACACTTCTTGGAGCTGTGAAAGCTGGTGTCTTTGTTGCACAGGCTGCCGGAAACGGTGGCCCCTTTCCTAAGACTTTAGTTTCGTATAGTCCATGGATAGCATCCGTAGCTGCAGCAATTGATGATCGTAGATATAAAAATCATCTGACTCTTGGAGATGGTAAAATCTTGGCTGGAATTGGTCTATCACCTTCTACACATTTTAACCAATCATACACATTGGTTGCTGCGAATGATGTTGTGCTAGACTCGTCAGTTATGAAGTACAATCCCACGGATTGCCAGAGACCTGAACTTCTAAACAAGAACTTGATAAAGGGGAACATTCTTCTTTGTGGTTATTCTTTCAACTTTGTAGTTGGTTCTGCATCAATAAAAAAGGTTTCAGAAACAGCGAAGTCTCTTGGTGCAGCTGGATTTGTTCTGTGTGTTGAAACTGTTTCTCCTGGAGCAAAATTTGATCCAGTTCCTGTTGGCATTCCTGGGATTGTTATCGCAGATGTCAGCAAGTCAAAGGAACTAATAGATTATTATAAAATCTCCACTCCAAGAGACTGGACTGGAAGGGTGAAGAGTTTCAAAGGTATTGGAAAAATTGGGGATGGTTTGATGCCTATTCTTCATAAGTCTGCACCACAGGTGGCTTTATTCTCTGCAAGAGGACCAAATATAAAGGACTTTAATTTCCAAGAGGCGGATCTTCTCAAGCCAGATATATTGGCACCGGGATCATTAATTTGGGGTGCTTGGTCTCTAAATGGAACTGATGAACCAAATTATATGGGAGAGGGATTTGCCATGATATCTGGAACTAGCATGGCTGCTCCACATATAGCCGGCATTGCGGCTCTCATAAAGCAGAAACATCCACATTGGAGCCCTGCCGCAATCAAATCAGCCTTGATGACGACATCAACAACTCTAGACAGAGCAGGAAATCCTATTCTAGCACAGCAATATTCTGAAACACAGGCGATGAAGCTAGTAAAAGCTACTCCTTTTGATTATGGGAGTGGACATGTTAATCCAAGAGATGCTTTGGACCCTGGGCTAATCTTTGATGCAGGATACAATGATTATCTAGGGTTCTTGTGCACAACACCCGGCATCGACATTCATGAGATAAAGAATTATACAAACACACCATGCAACAACACAATGGGCAACCCAGCAAATCTAAACAGTCCTTCCGTTACAGTTTCCCATCTAGTAAGAACTCGAGTTGTCACCCGAACCGTCACAAATGTTGCAGGGGAAGAAGAAACCTATGTGAATACAGCTAGAATGGACCCTGCAGTTGCCATTGAAGTCAATCCTCCAGCAATGACCATCAGACCAGGCGCATCGCGTAAGTTTACCGTGACACTAACGGTTCGGTCAGTGACCGGAACCTATAGCTTTGGTGAGGTTTTGATGAAAGGGAGCAGAGGTCACAAGGTGAGGATCCCTGTTCTGGCCAATGGATACTCAAGATAG	2463	0.4385	MRLVEFWCIFIIIILANILEPGKAEVYIVTVEGEPIISYTGGIDGFEATAVESDEKIDTTSELVTSYARHLEKRHDMLLEMLFDTGTYTKLYSYRHLINGFAVHLSPEQAETLRHAPGVKSVVRDWKVKRLTTHTPQFLGLPTGVWPTGGGYDRAGENIVIGFVDSGIYPHHPSFVTYNTEPYGPLPTYRGKCEVDPETKRSFCNGKIIGAQHFAQAAIAAGAFNPIVDFASPLDGDGHGSHTASIAAGRNGIPVRMHGHEFGKASGMAPRARIAVYKALYRLFGGFIADVVAAIDQAVHDGVDILSLSVGPNSPPATTKTTYLNPFDATLLGAVKAGVFVAQAAGNGGPFPKTLVSYSPWIASVAAAIDDRRYKNHLTLGDGKILAGIGLSPSTHFNQSYTLVAANDVVLDSSVMKYNPTDCQRPELLNKNLIKGNILLCGYSFNFVVGSASIKKVSETAKSLGAAGFVLCVETVSPGAKFDPVPVGIPGIVIADVSKSKELIDYYKISTPRDWTGRVKSFKGIGKIGDGLMPILHKSAPQVALFSARGPNIKDFNFQEADLLKPDILAPGSLIWGAWSLNGTDEPNYMGEGFAMISGTSMAAPHIAGIAALIKQKHPHWSPAAIKSALMTTSTTLDRAGNPILAQQYSETQAMKLVKATPFDYGSGHVNPRDALDPGLIFDAGYNDYLGFLCTTPGIDIHEIKNYTNTPCNNTMGNPANLNSPSVTVSHLVRTRVVTRTVTNVAGEEETYVNTARMDPAVAIEVNPPAMTIRPGASRKFTVTLTVRSVTGTYSFGEVLMKGSRGHKVRIPVLANGYSR*	821

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy4g1181	820	ProSiteProfiles	Serine proteases, subtilase domain profile.	125	676	-	-
	Ahy4g1181	820	SUPERFAMILY	Subtilisin-like	131	680	IPR036852	GO:0004252\|GO:0006508
	Ahy4g1181	820	Gene3D	-	693	817	-	-
	Ahy4g1181	820	CDD	Peptidases_S8_3	132	635	IPR034197	-
	Ahy4g1181	820	SUPERFAMILY	Protease propeptides/inhibitors	86	128	-	-
	Ahy4g1181	820	Pfam	Fibronectin type-III domain	721	814	IPR041469	-
	Ahy4g1181	820	Gene3D	Peptidase S8/S53 domain	158	689	IPR036852	GO:0004252\|GO:0006508
	Ahy4g1181	820	PRINTS	Subtilisin serine protease family (S8) signature	598	614	IPR015500	-
	Ahy4g1181	820	PRINTS	Subtilisin serine protease family (S8) signature	235	248	IPR015500	-
	Ahy4g1181	820	PRINTS	Subtilisin serine protease family (S8) signature	156	175	IPR015500	-
	Ahy4g1181	820	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	20	130	IPR037045	-
	Ahy4g1181	820	Gene3D	-	371	536	-	-
	Ahy4g1181	820	ProSitePatterns	Serine proteases, subtilase family, serine active site.	599	609	IPR023828	-
	Ahy4g1181	820	Pfam	Subtilase family	156	641	IPR000209	GO:0006508\|GO:0008236
	Ahy4g1181	820	ProSitePatterns	Serine proteases, subtilase family, aspartic acid active site.	161	172	IPR023827	-
	Ahy4g1181	820	PANTHER	CUCUMISIN-RELATED	16	819	-	-
	Ahy4g1181	820	CDD	PA_subtilisin_like	378	516	-	-
	Ahy4g1181	820	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	16	819	IPR045051	-
	Ahy4g1181	820	Pfam	Peptidase inhibitor I9	26	129	IPR010259	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy4g1181	Ahy-Chr4	31613365	31620757	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy4g1181	3	820	Subtilisin-like Serine Gene Family	AT4G30020	79.731	0.0	1347

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy4g1181	-		-	gmx:100784999	1436.78

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ahy14g1270	14	29237942	29245351	Ahy4g1181	4	31613365	31620757	hybridization
	Ahy11g3070	11	148342663	148347796	Ahy4g1181	4	31613365	31620757	PCT
	Ahy1g1903	1	95681713	95686924	Ahy4g1181	4	31613365	31620757	PCT
	Ahy4g1181	4	31613365	31620757	Ahy11g3070	11	148342663	148347796	PCT
	Ahy4g1181	4	31613365	31620757	Ahy1g1903	1	95681713	95686924	PCT