Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1162 ATGAGTGAAGACAATGTGATAGGGAGTGGATCATCTGGGAAGGTTTACAAGGTTGTTCTAAGCAGTGGTGCTGTTGTAGCTGTCAAGAAATTATGGAGAGACACCAAGAATGGAATTGGGATTGTTGGTTCTGAAAATGATGAATTTGATGTTGAAGTTGGAACACTAGGAAAAATAAGGCACAAAAATATAGTAAGGTTGTGGTGTTGCTGGAACAGTGGTGACAGCAGGCTCCTGGTTTATGAATATATGCCGAATGGGAACTTGACCGATATGTCGAAGAGTAACAAGAAAAGCTTGTTGGATTGGCCAACAAGGTACAAGATTGCAATTGATGCTGCTGAGGGGCTTTCTTATATGCATCATGGTATTGTGCCATCCATTGTTCATCGGGATGTAAAATCGAGCAACATATTGCTCGACAGCGAGTTTGGAGCAAAAGTGGCTGATTTTGGAGTTGCCAAAATTGTTAATGGAACTAGCCAAGGGGCAGAGTCCATGTCTGTAATTGCAGGCTCTTATGGTTACATCGCACCAGAATATGCATATACTCTTCGGGTTAACGAAAAGAGTGATATTTACAGCTTTGGTGTTGTCATTTTGGAGTTAGTAACCGAAAGACCTCCTAATCATGCAGATTATGGGAAAAATGATCTGGTAAAATGGGTCTCATCCTTGTTGGAACAGAAAGGAATGGATCATGTGATTGATCCTGCCCTTGATTCAACATACAGGGAGGAAATCAGCAAGGTACTTAGTGTGAGGTTTCTCTGCACAAACGTTCTCCCTATAAACCGCTCTGCAATGTGGTGGGTGGTGAAAATGCTTCGGGAAGCAGCAACGGTTCCCAGATCCCGAAGCGTGAGGGAGGTAACACACTCCCCTTATTTTGATAGAGATTTCTTATGGTGA 912 0.4265 MSEDNVIGSGSSGKVYKVVLSSGAVVAVKKLWRDTKNGIGIVGSENDEFDVEVGTLGKIRHKNIVRLWCCWNSGDSRLLVYEYMPNGNLTDMSKSNKKSLLDWPTRYKIAIDAAEGLSYMHHGIVPSIVHRDVKSSNILLDSEFGAKVADFGVAKIVNGTSQGAESMSVIAGSYGYIAPEYAYTLRVNEKSDIYSFGVVILELVTERPPNHADYGKNDLVKWVSSLLEQKGMDHVIDPALDSTYREEISKVLSVRFLCTNVLPINRSAMWWVVKMLREAATVPRSRSVREVTHSPYFDRDFLW* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1162 303 SUPERFAMILY Protein kinase-like (PK-like) 4 284 IPR011009 -
Ahy4g1162 303 Gene3D Transferase(Phosphotransferase) domain 1 84 294 - -
Ahy4g1162 303 Pfam Protein kinase domain 3 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g1162 303 SMART serkin_6 1 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g1162 303 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Ahy4g1162 303 ProSitePatterns Protein kinases ATP-binding region signature. 7 30 IPR017441 GO:0005524
Ahy4g1162 303 ProSiteProfiles Protein kinase domain profile. 1 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy4g1162 303 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 2 282 - -
Ahy4g1162 303 PANTHER RECEPTOR-LIKE PROTEIN KINASE 5 2 282 - -
Ahy4g1162 303 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1162 Ahy-Chr4 30452163 30457875 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1162 1 300 Receptor kinase-like Gene Family AT1G28440 58.786 4.73e-122 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Ahy4g1162 Pkinase 1.60E-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1162 - - ahf:112796601 613.224