Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1123 ATGGTCAATGGCAATGCTTTTATGAGGGTGGCAGTTGAAGAGAGATTTGGCCACACTTTTTTTGCTACGCTTCGAAAGCGTGGCGAAAAAGGTCAATGGCTACGCTTTGTTGGAGCACTTGTTCGTGTTGGTTTGGTTGCTCCAATTGATGTTGTTGTTCTTCCAGACAACACAGGGCTTGACCCCTCACAGACCTCTTTCTTCCAGGTTCTGAATATTCCAACCAAGATTAATAAGGGTACTGTTGAAATTATCACCCGTGTGGAACTTATTAAGAAGGGTGACAAGGTCGGTTCTTCTGAAGCTGCACTGCTTTCCAAGCTTAGCATCAGGCCCTTCTCATATGGTCTTATTGTCCTGTCTATGACAATAGTTCAGTATTTAGCCCTGAGGTTCTTGATCTCACTGACGACGACCTTGTTAAGGAGTTCGTCGTTGGAGTCTCAATGGTGA 453 0.4481 MVNGNAFMRVAVEERFGHTFFATLRKRGEKGQWLRFVGALVRVGLVAPIDVVVLPDNTGLDPSQTSFFQVLNIPTKINKGTVEIITRVELIKKGDKVGSSEAALLSKLSIRPFSYGLIVLSMTIVQYLALRFLISLTTTLLRSSSLESQW* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1123 150 Pfam Insertion domain in 60S ribosomal protein L10P 42 110 IPR040637 -
Ahy4g1123 150 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0-LIKE 37 122 - -
Ahy4g1123 150 Gene3D - 38 114 IPR043164 -
Ahy4g1123 150 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 37 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1123 Ahy-Chr4 27619977 27622288 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1123 37 122 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 88.372 2.10e-46 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1123 K02941 - ahf:112794771 286.189