Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1085 ATGGCGGATGCGGATAGGCCAGAGAAAGATTCCGGCCGCGGCGAAGAAACGAAGTACCGCGGCGTGAGGAAGAGGCCGTGGGGGAAGTATGGAGCCGAGATAAGGGATCCATCGAAGCCTACCGGAAGGATGTGGCTTGGGACATTCGACACGGCTGAGGAAGCCGCCAGAGCTTATGATCGAGCCGCCATTGCTTTAAGAGGTGGCCTTGCCATCCTTAATTTTCCGGATGAATATCATTCTCATCTCCCATTTATAGCTTCTTCTTCTTCTTCTTATTATTCTTCTACTTCTACTTCCATTGGATCAAGTTCTTCTTCTTCCAGTGCACAACAACGTAGGGAAGTTATTGAGCTTGAATGTTTGGACAATAAGGTTTTGGAGGATCTTCTTGAAGAAGAAGAAAGGAACAGAAGGAAATACTAA 426 0.4718 MADADRPEKDSGRGEETKYRGVRKRPWGKYGAEIRDPSKPTGRMWLGTFDTAEEAARAYDRAAIALRGGLAILNFPDEYHSHLPFIASSSSSYYSSTSTSIGSSSSSSSAQQRREVIELECLDNKVLEDLLEEEERNRRKY* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1085 141 SMART rav1_2 18 81 IPR001471 GO:0003700|GO:0006355
Ahy4g1085 141 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Ahy4g1085 141 PRINTS Ethylene responsive element binding protein signature 42 58 IPR001471 GO:0003700|GO:0006355
Ahy4g1085 141 SUPERFAMILY DNA-binding domain 18 78 IPR016177 GO:0003677
Ahy4g1085 141 Gene3D AP2/ERF domain 17 77 IPR036955 GO:0003700|GO:0006355
Ahy4g1085 141 ProSiteProfiles AP2/ERF domain profile. 18 76 IPR001471 GO:0003700|GO:0006355
Ahy4g1085 141 PANTHER ETHYLENE RESPONSE FACTOR 4 135 - -
Ahy4g1085 141 MobiDBLite consensus disorder prediction 1 22 - -
Ahy4g1085 141 PANTHER DNA-BINDING DOMAIN 4 135 IPR044808 GO:0003700|GO:0009873
Ahy4g1085 141 Pfam AP2 domain 17 68 IPR001471 GO:0003700|GO:0006355
Ahy4g1085 141 MobiDBLite consensus disorder prediction 90 113 - -
Ahy4g1085 141 CDD AP2 17 77 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1085 Ahy-Chr4 23526779 23527631 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1085 15 138 AP2-EREBP Transcription Factor Family AT3G23230 58.871 2.14e-42 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Ahy4g1085 AP2 1.20E-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1085 - - adu:107483754 212.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1170 14 23039482 23040339 Ahy4g1085 4 23526779 23527631 hybridization