Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1051 ATGGCTAAACTTGAGTCTAATCACACTCCCCCACCCACAATGAGCCCTACCATAAGCAAACCATGTTACCCTCCACAATCTCCCAACAACAATTCAGGTTGCTTCAACTTAATGGTTATTTTGGCGGCAATTGTATGCGCCTTCCTTTGCGCGCTAGGCCTCAACACCATTCTACAATGCACGCTACAATGCGCGAATCACGTCCTCACGGAGCCTTTACAATGGATTGCTTCCAGAGGGATCAACTCAGGGCTCAAGAAGAAAGAAATGGTAGCTTTGCCAACTTCAATTTATAATAGTAACAGCCATAATAACAATAGTAATAGTAGCAGTAGTAATTCAGGGTCATCACCATCTTCAGGTTCTGCTAGTTGTGCAATTTGCCTAGCTGATTTCTCTGATGGAGACAAGATAAGGTTTCTTCCAAAGTGTAATCATCGTTTTCATGTGGCTTGCATTGATAAGTGGCTTCTTTCCCATTCCTCTTGCCTAACATGGAACTTCCTCAAGTCTAATGATACATCACACCCTTTTCATATTCTCATAGCTTAA 552 0.4239 MAKLESNHTPPPTMSPTISKPCYPPQSPNNNSGCFNLMVILAAIVCAFLCALGLNTILQCTLQCANHVLTEPLQWIASRGINSGLKKKEMVALPTSIYNSNSHNNNSNSSSSNSGSSPSSGSASCAICLADFSDGDKIRFLPKCNHRFHVACIDKWLLSHSSCLTWNFLKSNDTSHPFHILIA* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1051 183 ProSiteProfiles Zinc finger RING-type profile. 125 163 IPR001841 -
Ahy4g1051 183 PANTHER OS06G0666500 PROTEIN 24 164 - -
Ahy4g1051 183 Pfam Ring finger domain 124 163 IPR001841 -
Ahy4g1051 183 MobiDBLite consensus disorder prediction 1 22 - -
Ahy4g1051 183 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 77 166 IPR013083 -
Ahy4g1051 183 SUPERFAMILY RING/U-box 124 163 - -
Ahy4g1051 183 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 24 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1051 Ahy-Chr4 21824611 21825162 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g1051 24 163 C3H Transcription Factor Family AT2G17450 38.776 8.11e-28 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1051 - - ahf:112794746 345.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1148 14 21979166 21979851 Ahy4g1051 4 21824611 21825162 hybridization