LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy4g1028	ATGGAAATGGAACCCTCATTGTTCTACTCTCTTATACTCTTCCCAGTTTTTCTCTACACCACCTTCAAGCTTCTCTCTAAGAGCAGAAGATTAAGAAACCTTCCACCAGGTCCAACACCTCTTCCAATAATAGGCAACCTCCACCACCTAAAACCGCCGCTCCACCGCGCATTCCACCGCATGTCGCAGACATACGGCCCCATATTCTCCTTGTGGTTCGGCTCGCGCCTCGCGGTCGTCGTCTCATCGCCGTCGGCTTTCCAAGAATGCTTCACTAAGAACGATATCGTGTTGGCGAATAGGCCAAGGTCTCTGTCCGGAAAGTACATATTCTACAACTACACCACCGTAGGGTCTTGCTCCTACGGCGACCACTGGCGCAACCTCCGCCGCATCACTTCTCTTGATGTTCTCTCAACGCAACGGACTCACTCCTTCGCCGGAATCCGAAAGGATGAAACCGACAGGTTGATGACAAAATTGGCGAAGGAAACAGGGTCAGGGTTTAGTGAAGTGGAGCTAAGTTCTATCTTTCATAATATGACTTACAACAACATGATGAGAATGATATCAGGGAAAAGATACTATGGTGATGACCATGACATCAAAGATTTGAATGAAGCCAAAGAATTTAGGGACACAGTCACAGAGTTGCTTCAAATGGCAGGTGTTTCTAACAAAGCAGATTACATTCCTTTCCTAAGGTGGTTTGACTTTGGCAATTCCCAAAAGAAGTTGAAGAATATTAGTAACAGGTTTGATGATTTCTTGAATAAACTCATCCAAGAGAACCGTACTAGGAAGCAGCACCAAGAAGGTGAAAATTCCATGATTCACCATCTCTTGAATCTTCAGGAATCCGACCCTTACTACTATACTGATCAAATCATCAAAGGGCTAGCTCTGGCCATGCTGTTTGCGGGAACAGATTCATCTGCTGTGACTTTGGAGTGGTCACTGTGTAATTTACTAAATCACCCTGAGGTTTTGAACAAGGCAAGAAAAGAAATAGAGACACAAATTGGAGAAGAGAGGTTGTTAAGTGAATCAGATCTTCCAAAACTACCTTACCTTAGGAACATTATTCTAGAGTCACTAAGGTTGTACACGCCAGCACCATTGCTCATACCACACGTGTCATCACAAGACATCACAATAGGAGGATTCAATGTTCCAAAGAACACCATAGTGATGATCAATGCTTGGGGGATGCATAGAGATCCTGCGGTGTGGAGTGATGCCACGTGTTTCAATCCGGAGAGGTTTGAGAAAGAAGGAGAGGAGAAGAAGTTGGTTGCTTTTGGATTGGGACGAAGGGCTTGCCCTGGTGAAGCAATGGCTATGCATGGTGTTGGTTTCACTTTGGGATTGTTGATTCAATGCTTTGATTGGAAAAGGGTTAGTGAGGAACCCATTGATATGAGAGAAAGAAATTGGTTCACTCTTTCAAGGTCGACTCCATTGAAGGCTATGTGTAAACCACGCCCAATTGTGAACAAAGTTTTCTCAAATATTTAG	1518	0.444	MEMEPSLFYSLILFPVFLYTTFKLLSKSRRLRNLPPGPTPLPIIGNLHHLKPPLHRAFHRMSQTYGPIFSLWFGSRLAVVVSSPSAFQECFTKNDIVLANRPRSLSGKYIFYNYTTVGSCSYGDHWRNLRRITSLDVLSTQRTHSFAGIRKDETDRLMTKLAKETGSGFSEVELSSIFHNMTYNNMMRMISGKRYYGDDHDIKDLNEAKEFRDTVTELLQMAGVSNKADYIPFLRWFDFGNSQKKLKNISNRFDDFLNKLIQENRTRKQHQEGENSMIHHLLNLQESDPYYYTDQIIKGLALAMLFAGTDSSAVTLEWSLCNLLNHPEVLNKARKEIETQIGEERLLSESDLPKLPYLRNIILESLRLYTPAPLLIPHVSSQDITIGGFNVPKNTIVMINAWGMHRDPAVWSDATCFNPERFEKEGEEKKLVAFGLGRRACPGEAMAMHGVGFTLGLLIQCFDWKRVSEEPIDMRERNWFTLSRSTPLKAMCKPRPIVNKVFSNI*	506

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Ahy4g1028	505	Gene3D	Cytochrome P450	21	495	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Ahy4g1028	505	Pfam	Cytochrome P450	35	482	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Ahy4g1028	505	PANTHER	CYTOCHROME P450 FAMILY MONOOXYGENASE	3	501	-	-
Ahy4g1028	505	PRINTS	E-class P450 group I signature	359	377	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Ahy4g1028	505	PRINTS	E-class P450 group I signature	441	464	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Ahy4g1028	505	PRINTS	E-class P450 group I signature	431	441	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Ahy4g1028	505	PRINTS	E-class P450 group I signature	62	81	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Ahy4g1028	505	PRINTS	E-class P450 group I signature	316	342	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Ahy4g1028	505	PRINTS	E-class P450 group I signature	181	199	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
Ahy4g1028	505	PRINTS	E-class P450 group I signature	296	313	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy4g1028	Ahy-Chr4	20821736	20826287	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy4g1028	8	502	Cytochrome P450	AT4G37330	50.402	0.0	526

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy4g1028	K13260		-	gmx:100790507	734.947

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ahy14g1126	14	21206862	21210218	Ahy4g1028	4	20821736	20826287	hybridization

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