Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1003 ATGTCTCAATTTCTCATTAAAATCATTTCTCAACCCAAACTCTATTCTTGTATCAGCAATCCATGGCCATGGCATTCTTTGAGACTATCCTCAACCCTTTCTTCTTCTTCTTCTTCAAGTTCCAGAGGCAATTCTTTCATTGTCTCATACCTCGTCGGAACTTGTGGGTTCTCACCAGAACGCGCAGTTTACATTTCCAAGCGCTTCAGCTTCGAAACAAGCGATAAACCAGATGCAGTGATTTCGTTCATCAAGAATATCGGTCTCTCCCAAACGACGACGTTGAGAGTCATCCAATCTCTGCCCCAATTACTCGTAGCAAACCCTAAAACTCTTCAGCCAAAAATCGATTTTTTCAAGTCCAAAGGGTTTTCCTCCTCTGACATATGCAGGATCATAGAAGGCTGCCCTTCAATCCTCACCCGAAGCTTGCAGAATGAAATCGCTCCCTCCTTCGATTGCTTCGACGCCATGTTTCAGTCTAGGCACAAGCTCATAAAGGCTGCTACCGGTTATTCTGCTATGCTGTATGATTTTGCAAGGTTTACAGAACCTAATATAAAGCTTCTTAGAGATGAAGGAGTTGCTGAATCACATATTGTTAGGTTAATTCAGTACTACCCCAACCAATTGAAGAATAGCCCTAAGAAGTTTAAGGAGGCATTGCAAGAAGTTAAGGAGATGAAGTTTGATCCCTTGACGTTTCAATTTATTGTGGCTATTCACGTGAAGACAAAAATAGGAAAATCCACATGGGAAAGAAAGGAAGGAATTTATAGAAAGTGGGGTTGGACCGATGCCGATATTATCACAGCTTTCAGACGCTGTCCGTGGTGCTTCGCCAGCTCCGACAACAAGATTGAAGCAGTCATGGATTTTTTGGTGAATCGATTGGGTTATGCATCTTCTTCTGTTGTTAAGTATCCGTTGATATTGTCCATGAGTTTGAAAAGGAGAATCATTCCAAGGGGTTCTATTTTTCTGGTTTTGCAGTCTAAGGGTCTGGTGAGGAAGCTGGGCTTGGCTTCAGTGTTTAGGATTAATGAAAAGACCTTCTTGAGTGCGCTTTGA 1071 0.422 MSQFLIKIISQPKLYSCISNPWPWHSLRLSSTLSSSSSSSSRGNSFIVSYLVGTCGFSPERAVYISKRFSFETSDKPDAVISFIKNIGLSQTTTLRVIQSLPQLLVANPKTLQPKIDFFKSKGFSSSDICRIIEGCPSILTRSLQNEIAPSFDCFDAMFQSRHKLIKAATGYSAMLYDFARFTEPNIKLLRDEGVAESHIVRLIQYYPNQLKNSPKKFKEALQEVKEMKFDPLTFQFIVAIHVKTKIGKSTWERKEGIYRKWGWTDADIITAFRRCPWCFASSDNKIEAVMDFLVNRLGYASSSVVKYPLILSMSLKRRIIPRGSIFLVLQSKGLVRKLGLASVFRINEKTFLSAL* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1003 356 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 28 354 - -
Ahy4g1003 356 PANTHER CGI-12 PROTEIN-RELATED 28 354 IPR003690 GO:0003690|GO:0006355
Ahy4g1003 356 Pfam mTERF 183 353 IPR003690 GO:0003690|GO:0006355
Ahy4g1003 356 Pfam mTERF 75 156 IPR003690 GO:0003690|GO:0006355
Ahy4g1003 356 SMART mt_12 270 301 IPR003690 GO:0003690|GO:0006355
Ahy4g1003 356 SMART mt_12 302 336 IPR003690 GO:0003690|GO:0006355
Ahy4g1003 356 SMART mt_12 130 173 IPR003690 GO:0003690|GO:0006355
Ahy4g1003 356 SMART mt_12 201 231 IPR003690 GO:0003690|GO:0006355
Ahy4g1003 356 SMART mt_12 95 125 IPR003690 GO:0003690|GO:0006355
Ahy4g1003 356 Gene3D Transcription termination factor 3, mitochondrial 60 177 IPR038538 -
Ahy4g1003 356 Gene3D Transcription termination factor 3, mitochondrial 178 356 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1003 Ahy-Chr4 20146146 20147840 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Ahy4g1003 mTERF 1.30E-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1003 K15032 - qsu:111987836 276.944