Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g1001 ATGTTTCATATTCGCATCAAAATTATTTCTCCAACCTTGCAAAAACTGGTTTCTTCGCTAGGTAGCAATCCATGGCTATGGCTTGCTTCGAGACTCATCTCAACCTCGTCTCCTTCTTCAGCCTCCAAAGACAACTCTTTTGCACTCTCTTACCTAACTCATACTTGTGGGTTCTCACCAGAACGCGCTATCACCATTTCCAAGCGCCTCAAGTTAGAAACAAGTGAAAAACCAGATACAGTGATTGAGTTCTTCAAGAACCAAGGTTTGTCCCAAACTATGATCTTGAAAGTCCTTCGAACTGTTCCAGACTTACTTTTAGTCAAACCCGAGAACACTTTGCAGCCAAAGTTTGATTTTTTCAAGTCAAAAGGGTTTTCTGTCTCTGACATTCACAGCATGATATTAACATCCCCTGAAATTCTCAAAAGAAGCTTGAATAATGAGATCATTCCCTGCTTCAATTTCCTTGACAACATGTTTGAATGTAAGCACAACCTCATGAAAACTGTTGTAAGCTATTCAGGTGTTCTACATATCTTTGCCAAACGTATTGAACCTAATATCAAGCTGCTGAGAGAAGAGGGTGTTCCTGAATCACACATTCTTAGGTTGTTAGAGTACTATGGCAAGACAATTAAGGTATGTCCTACGCGATTTAAGAAGGCAGTGGAGGAAGTGAAGGAGATGAAGACTGATCCACTCAAGTTGCAATTTGTTATATATGTTCATATAAAGTTACATCTGAGCAAATCCACATGGGAAAGAAAGAAAGGTATATATAGAAAATGGGGTTGGACCGAGGATGATATTTCTAAAGCATTTAGAACCCACCCGTTCTGTATGTGCACTTCAGACAGTAAGATTGAGGCGGTCATGGATTTTCTGGTGAACACATTGGGCTGCAAATCTTCTGACATTATCAGATGTCCATCACTGTTGACCATGAGCTTGAGAAAGCGAATTATTCCAAGGGGATCTGTTGTTAAAGCTTTGCTGTCGAAGGGTCTGATTAAGAAGCTGAGCTGGACTGTATTTCGGTATAATGAATTGGAGTTCCTGGATAAGTTTGTCCATTGTTATGACAAGGAAGCCAATGAGCTATTGAAGTTGTATCGGAAAATATGA 1128 0.3989 MFHIRIKIISPTLQKLVSSLGSNPWLWLASRLISTSSPSSASKDNSFALSYLTHTCGFSPERAITISKRLKLETSEKPDTVIEFFKNQGLSQTMILKVLRTVPDLLLVKPENTLQPKFDFFKSKGFSVSDIHSMILTSPEILKRSLNNEIIPCFNFLDNMFECKHNLMKTVVSYSGVLHIFAKRIEPNIKLLREEGVPESHILRLLEYYGKTIKVCPTRFKKAVEEVKEMKTDPLKLQFVIYVHIKLHLSKSTWERKKGIYRKWGWTEDDISKAFRTHPFCMCTSDSKIEAVMDFLVNTLGCKSSDIIRCPSLLTMSLRKRIIPRGSVVKALLSKGLIKKLSWTVFRYNELEFLDKFVHCYDKEANELLKLYRKI* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g1001 375 PANTHER CGI-12 PROTEIN-RELATED 31 374 IPR003690 GO:0003690|GO:0006355
Ahy4g1001 375 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 31 374 - -
Ahy4g1001 375 SMART mt_12 96 127 IPR003690 GO:0003690|GO:0006355
Ahy4g1001 375 SMART mt_12 272 303 IPR003690 GO:0003690|GO:0006355
Ahy4g1001 375 SMART mt_12 304 338 IPR003690 GO:0003690|GO:0006355
Ahy4g1001 375 SMART mt_12 168 198 IPR003690 GO:0003690|GO:0006355
Ahy4g1001 375 SMART mt_12 132 164 IPR003690 GO:0003690|GO:0006355
Ahy4g1001 375 Pfam mTERF 247 350 IPR003690 GO:0003690|GO:0006355
Ahy4g1001 375 Pfam mTERF 82 211 IPR003690 GO:0003690|GO:0006355
Ahy4g1001 375 Gene3D Transcription termination factor 3, mitochondrial 164 371 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g1001 Ahy-Chr4 20120252 20123044 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Ahy4g1001 mTERF 5.20E-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g1001 K15032 - twl:120002213 310.071