Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0988 ATGCAAACGGTCCGGTCCTCTTCCTATAACCGTTGGGAGAAAACCATTAAAAAACCGTCAAATCGGTCGATAACCGGCCGGTTGGGCCGGATCGGTAACCAGCCGCCCTCTGAAGCAAAAGAACCCCAAACCCTAGCCCTCCATCATCGCCGCCGTTCTGAGGTCGTCAGCACTACCGCCGTCCACAGGTCCTTAGCACACCCGCTTCTTCCTCTTTCCCGTGTCAGGAACCCAGTAACTCGACAGATCCTCTTCGTCTTCACTGGCTTCTCGAACCCAGGAGTTCCTCATAAAATTGAATGGGGTCTAGTTTCTTCCTTTTTTTTATTTTTCCCATTTTTCCCAAAACCCCCGTTCCTCTCGCTCTCGCCCGCTTCTCGCATCCCATCGGTTCTCGGCTTCTCGCCACAACCAAAGGAACTCTCTCTGCTTCCACGCCATCGTCAAAGTCGCTTTTTACTCTCTAAACTGCCTTCGCTTCTCTTCTTGCTCAAGGTGTCCGTGCTCTATTCTTCTGATTTGAGGAAGCTTGTGGATGAAGTAAAGGAATTAGGGTTTGATCCGTCATCGGTTAAATTCGCCATAGCTTTGCTAGCCAAGAAGACTATACGGAAATCACTGTGGGATGCGAAAGTCGATATCTTGAAGAGCTGGGGTTGGTCTAAAGAAACAACGTCCCAAGCATTCTGGAGGAACCCTTTATGTATGCTATCATCTAAGGATAAGATTAATGAGGTGATGAAACTTTGGGTCAATCAATTAGGTTGGGACCCTTTGGCTCTTGCCAAGATTCCATGGCTTTTTGGATATAATTTGGAGAGAAGGATTATTCCGAGGGCTTTTGTTCTTCAGTATTTACTTTCAAGAGGTCTGAGAAACAAGAATGATAATTTAAGTACCCCATTTTATGTTTCTGAAGAGTTGTTCTTTAACAAGTTTGTGGAATGTTTTACCGAGGAAAGGTCTCAACTACGTAAGATATACTATGAGAAAAAAGGATGTTCATGA 1008 0.4554 MQTVRSSSYNRWEKTIKKPSNRSITGRLGRIGNQPPSEAKEPQTLALHHRRRSEVVSTTAVHRSLAHPLLPLSRVRNPVTRQILFVFTGFSNPGVPHKIEWGLVSSFFLFFPFFPKPPFLSLSPASRIPSVLGFSPQPKELSLLPRHRQSRFLLSKLPSLLFLLKVSVLYSSDLRKLVDEVKELGFDPSSVKFAIALLAKKTIRKSLWDAKVDILKSWGWSKETTSQAFWRNPLCMLSSKDKINEVMKLWVNQLGWDPLALAKIPWLFGYNLERRIIPRAFVLQYLLSRGLRNKNDNLSTPFYVSEELFFNKFVECFTEERSQLRKIYYEKKGCS* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0988 335 Pfam mTERF 210 307 IPR003690 GO:0003690|GO:0006355
Ahy4g0988 335 Gene3D Transcription termination factor 3, mitochondrial 116 326 IPR038538 -
Ahy4g0988 335 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 161 331 - -
Ahy4g0988 335 PANTHER CGI-12 PROTEIN-RELATED 161 331 IPR003690 GO:0003690|GO:0006355
Ahy4g0988 335 SMART mt_12 258 292 IPR003690 GO:0003690|GO:0006355
Ahy4g0988 335 SMART mt_12 160 187 IPR003690 GO:0003690|GO:0006355
Ahy4g0988 335 SMART mt_12 226 257 IPR003690 GO:0003690|GO:0006355
Ahy4g0988 335 MobiDBLite consensus disorder prediction 22 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0988 Ahy-Chr4 19461878 19467785 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Ahy4g0988 mTERF 9.40E-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0988 K15032 - gmx:100792944 209.534