Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0983 ATGTTTAACTCCCACCGTTACAAACCCCTTATCTATCTAAACCTAAAAGTTCTATTCCGAAGAACACAACCACACATGTTCTGCACTTCACAATCACACTCTTTGACGGTTTCATACCTCATCAATAACCTTGGCTTCACCCCACAATCTGCTCTAAACGCATCAAAACGGCATCGTTTCAAGACCCCACACAAGGCAGACTTAATAATCGCATTCTTCAAGACCCATGGATTCTCCCATTCCCAAATCGCTGCCATTGTTGCCAAGCTACCTAAGATACTTTCAGCCAATCCGGAAAGAATCCTGCCAAAGTTTCAATTTCTGGCCTCCAAAGGTGCTTCCACCGATGACATTGTTCTGCTATCCACTAGGAACCCTAGATTCTTGCATTTGAGCCTCAAGAACAACATAATCCCTACTTATGCAATGCTGAAAACCTTCTTTCAATCCGATCAGAAAACGCTCCGTTGCATTGCTTCTATCCCTGGTTTGTTTATGGAGGCTCGCTTGGTGAAAAATGTCAAGTTGTTGGCTGATGCAGGAGTCTCTGACTCCGCTATCGGCTATTTGTTGCGGACCAGAGTTTTAGTGCTCTTGTCTGCTGACTTGAGGAAGCAGGTGGATGAAATAAAGGAATTAGGGATTGATCCTTCAACGGTTAAGTTCGCCATAGCTTTGCAAGCCAAAAAGACTGTACCGAAATCACTGTGGGATGCAAAAGTCAATGTCTTGAAGAGCTGGGGTTGGTCTAAAGAAACAATGTCCGAAGCATTCAGGAGGAACCCTTTATGTATGCTATCATCTAAGGATAAGATTAATGAGGTGATGAAACTTTGGGTCAATCAGTTAGGTTGGGACCCTTTGGCTCTTGCCAAGATTCCATGGCTTTTTGGATATAATTTGGAGAGAAGGATCATTCCGAGGGCTTTTGTTCTCCAGTATTTACTTGCAAAAGGATTGAGAAACAAGAGTGACAATTTGTGTCTGCCGTTTTTTATTCCGGAAGACATGTTCCTTAAAAGATTTGTGGAAAGTTTTACAGAAGATATGTCTCAACTACTTAAGATATACCATGAGAAAAAAAAGATGTTTATGATAACTGCCTAG 1107 0.4192 MFNSHRYKPLIYLNLKVLFRRTQPHMFCTSQSHSLTVSYLINNLGFTPQSALNASKRHRFKTPHKADLIIAFFKTHGFSHSQIAAIVAKLPKILSANPERILPKFQFLASKGASTDDIVLLSTRNPRFLHLSLKNNIIPTYAMLKTFFQSDQKTLRCIASIPGLFMEARLVKNVKLLADAGVSDSAIGYLLRTRVLVLLSADLRKQVDEIKELGIDPSTVKFAIALQAKKTVPKSLWDAKVNVLKSWGWSKETMSEAFRRNPLCMLSSKDKINEVMKLWVNQLGWDPLALAKIPWLFGYNLERRIIPRAFVLQYLLAKGLRNKSDNLCLPFFIPEDMFLKRFVESFTEDMSQLLKIYHEKKKMFMITA* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0983 368 PANTHER CGI-12 PROTEIN-RELATED 26 362 IPR003690 GO:0003690|GO:0006355
Ahy4g0983 368 SMART mt_12 84 114 IPR003690 GO:0003690|GO:0006355
Ahy4g0983 368 SMART mt_12 255 286 IPR003690 GO:0003690|GO:0006355
Ahy4g0983 368 SMART mt_12 119 151 IPR003690 GO:0003690|GO:0006355
Ahy4g0983 368 SMART mt_12 287 321 IPR003690 GO:0003690|GO:0006355
Ahy4g0983 368 Gene3D Transcription termination factor 3, mitochondrial 164 356 IPR038538 -
Ahy4g0983 368 Pfam mTERF 71 220 IPR003690 GO:0003690|GO:0006355
Ahy4g0983 368 Pfam mTERF 239 321 IPR003690 GO:0003690|GO:0006355
Ahy4g0983 368 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 26 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0983 Ahy-Chr4 19394071 19398776 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Ahy4g0983 mTERF 5.00E-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0983 K15032 - gmx:102666739 362.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1080 14 19272079 19273098 Ahy4g0983 4 19394071 19398776 hybridization
Ahy11g2542 11 141295574 141296719 Ahy4g0983 4 19394071 19398776 PCT
Ahy1g2382 1 101897266 101901529 Ahy4g0983 4 19394071 19398776 PCT
Ahy4g0983 4 19394071 19398776 Ahy11g2542 11 141295574 141296719 PCT
Ahy4g0983 4 19394071 19398776 Ahy1g2382 1 101897266 101901529 PCT