Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0969 ATGCTTGGTCCTGAAACAGAACTTAAGATAAGTTTTGGCTACCAATGCAATGGCATTGCAGATATCTCGTGCAAGTCTATCAACGGCTACAAAATCCTTCCTTATTTCCCTAGAACAAGCAGTTTCTCTTGCTTGTCTGGTGCTGCCGTTAGCGCAAATGCTACACTTGCCAACACAAACATCTGCAATGGTGTGATAGGGGAAGAAATCCTTCCTAGTTTGGACTCTCCTAAATCGTTTCGTAAGATACCCTCTTCGCCAAGTCTTTCGAAGTTGGACATACTATCATCTTCTCTCCATGGTAGTTTCTCAAACCTCAGTTGCAGTCCATCCACACAAAGTGATATGTTTGATTATGACGCTTGTATGGTGAGTGCTCCTTGCAAAAGTGAAGGATTTCTCAATGCTATGGAAGTACAAGTAGCAGGGGGAGCTGCTGGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAAGAAAATGGCTGGCTCTTTTGTGGAATTTATGATGGCTTTAATGGCAGGGATGCAGCTGACTTTCTGGCCTGTACCCTTTACGACACTATCATATCTTATTTTAATATGCTGTATTTGGATTTGGAATCAGATTCTATCAAAGCTTCCAACAGTCTTGATTTGGGTGGATCATCTCAATATGAGTTGGATGAGCGTCAATCTCGTTCTCAGAAATCATTTTCACATGCTATTCTTGATAGCCTCCAACGTGCTCTCAATCAGGTTGAGAATGATTTCTTGTACATGGTTGAGCAGGAAATGGAGGACCGTCCGGATTTAGTTTCTGTCGGATCTTGTGTTTTACTTGCACTTCTTCATGGGGAAAATTTGTATACACTTAATCTTGGTGACAGCAGAGCAGTATTGGCAACGTGCAGTATGGATGGCGGAATGAGTGGCAAAGAGAGAAGAATGAAAGCTATCCAGCTTACTGATATTCATACTGTTGACAATGGAGCCGAAAGAGCTCAACTTCTTGCTGGTCACCCTGATGATCCCAAGGCCATCGTAGCTGGGAAAGTGAAAGGAAAATTGAAGGTTACTCGCGCTTTTGGAGTTGGCTACTTGAAAAAGAAAATTCTGAATGATGCATTGATGGGAATTCTTCGAGTGCGTGATCTCATAAGCCCACCATACATTTCCATTCAACCGTCACTAAATGTGCATAGAATCTCAAGTTCCGATCAATTTGCTATAGTTGCGAGTGATGGTTTGTTCGATTTCTTCAGCAATGATGAAGCAGTAGAGCTTGCAGAGTCTTACATCCTAAGCAATCCATTTGGTGATCCAGCAAAATTCCTTGTTGAGCAACTTATAGCAAGAGCTGCTGATTCTGCAGGTTTTAGCACGGAAGAGTTGATGAATGTTCCGGCCGGGAGGAGGAGGAAGTACCATGATGATGTGACCGTGATTGTCATCATCCTTGGGATGAATCAACGGACGTCAAAGGCATCAACTTGCATCTAA 1476 0.4268 MLGPETELKISFGYQCNGIADISCKSINGYKILPYFPRTSSFSCLSGAAVSANATLANTNICNGVIGEEILPSLDSPKSFRKIPSSPSLSKLDILSSSLHGSFSNLSCSPSTQSDMFDYDACMVSAPCKSEGFLNAMEVQVAGGAAGEDRVQAVCSEENGWLFCGIYDGFNGRDAADFLACTLYDTIISYFNMLYLDLESDSIKASNSLDLGGSSQYELDERQSRSQKSFSHAILDSLQRALNQVENDFLYMVEQEMEDRPDLVSVGSCVLLALLHGENLYTLNLGDSRAVLATCSMDGGMSGKERRMKAIQLTDIHTVDNGAERAQLLAGHPDDPKAIVAGKVKGKLKVTRAFGVGYLKKKILNDALMGILRVRDLISPPYISIQPSLNVHRISSSDQFAIVASDGLFDFFSNDEAVELAESYILSNPFGDPAKFLVEQLIARAADSAGFSTEELMNVPAGRRRKYHDDVTVIVIILGMNQRTSKASTCI* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0969 491 PANTHER PROTEIN PHOSPHATASE 2C 213 490 IPR015655 GO:0004722|GO:0006470
Ahy4g0969 491 Pfam Protein phosphatase 2C 225 432 IPR001932 -
Ahy4g0969 491 Gene3D - 117 487 IPR036457 -
Ahy4g0969 491 SMART PP2C_4 124 476 IPR001932 -
Ahy4g0969 491 ProSiteProfiles PPM-type phosphatase domain profile. 133 478 IPR001932 -
Ahy4g0969 491 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 213 490 - -
Ahy4g0969 491 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 2 208 - -
Ahy4g0969 491 CDD PP2Cc 146 478 IPR001932 -
Ahy4g0969 491 PANTHER PROTEIN PHOSPHATASE 2C 2 208 IPR015655 GO:0004722|GO:0006470
Ahy4g0969 491 SUPERFAMILY PP2C-like 147 479 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0969 Ahy-Chr4 18817745 18821448 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0969 4 491 PP2C-type Phosphatase Gene Family AT3G16560 63.673 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0969 - - gmx:102666789 712.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1066 14 18775979 18779681 Ahy4g0969 4 18817745 18821448 hybridization
Ahy11g2551 11 141464456 141467418 Ahy4g0969 4 18817745 18821448 PCT
Ahy1g2371 1 101755272 101758150 Ahy4g0969 4 18817745 18821448 PCT
Ahy4g0969 4 18817745 18821448 Ahy11g2551 11 141464456 141467418 PCT
Ahy4g0969 4 18817745 18821448 Ahy1g2371 1 101755272 101758150 PCT