Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0967 ATGGAGGATTCAGTAGCGATGCAGAAGCGGAAGCAACGAGAGTTTGCTTTGGCATCAGTCTCTGAGCTCTGTTCTTCTTTGATTCCTCCTCCTCCTTCTGAAGCTGGTTCTTCTTCGCCGGGGATTGCTCGCTTCGCCTCCGGCGATGGCTCCTTGCCAGAACTCCAAATCCTCCGTGAGTCCAATCAGGTTGCTCTCAATGTAGATCTCCGAGCTGCTCAGATATTTAGATTAGGTCCTGTTCAATCGGTTTGCATGGTGGAAGGATCCGATGCGGGCAAACAGACATCATATTCAAGGGGAGTCGCTATTCAGTTTAGAAATGAGGAAGATAGTGAGGCCTTCCATTGTGTATACCAACAATGGAAGAAGGAATTCAATGTTCAAGGGAGTAACCTACCAAATGGAACAAATGCGATAACTTCCAAAAGCAAATTCGATGAAAAGATAGAGTCTTCTTCTGCAAAAATGTATTTCCATTATTATGGACAACTTCTGCATCAGCAAAATATGTTGCAGGACTATGTGAGGACAGGAACATATTATGCTGCAGTTATTGAGAACCGTGCTGATTTCATGGGTCGTGTAGTAGTTGATGTTGGTGCTGGCAGTGGTATTTTGTCGTTATTTGCTGCTCAGGCTGGTGCAAAACATGTTTATGCTGTGGAAGCATCTGAAATGGCAGAATATGCACGAAAACTTATAGCTGGAAACCCAATACTCGGTCAACGAATTACAGTTATCAAAGGCAAAGTGGAGGATGTTGAGTTGCCAGAGAAAGCTGATATTCTGATCTCTGAGCCCATGGGCACTTTGTTAGTTAATGAAAGAATGCTGGAGTCATATGTCATTGCCAGAGACAGGTTTCTCACACCTCATGGGAAAATGTTTCCTTCAGTGGGGAGGATTCACATGGCACCTTTCAGTGATGAATATTTGTTTGTTGAAATTGCTAATAAGGCCCTGTTTTGGCAGCAACAAAACTATTTTGGCGTTGATTTGACACCCTTACATGGGACTGCATTTCAAGGATATTTTTCTCAGCCTGTGGTGGATGCTTTTGATCCAAGGTTGTTAGTAGCTCCTCCATCGTTTCATGTGATAGACTTCAACAAAATAAAGGAAGAAGAACTATATGAAATTGACATTCCTCTTAGATTTATATCCACTGTGGGTGCCAGAGTACATGGGTTGGCATGTTGGTTTGATGTATTGTTCAATGGAAGTACTGTACAGAGGTGGCTTACAACTGCCCCAGGTTCACCAACAACTCATTGGTATCAATTACGCTGTGTTCTGTCTCAGCCAATTTATGTCATGGCAGGACAAGAAATTACGGGCAGGCTTCACTTGATTGCCCACAATGCACAAAGTTATACAATTTACTTGACATTATCAGCTAAAATGTGGGGGCCTGGTGCTGAACAAGGAGGGATTCTACAAACATCATCTTGTAAACTTGATCTGAAAGAACCCTACTACAGAATGTCTCAGCCTCAGGTGTATCCAGTATCCCAAGATCAGCAACCTCAATCACTTATACAGACACAGGATGTAAATATCCAATCTCAGGATTTGGATGAAGCTGAGCTAATGCAACAGCCTTCGCCAAATTCATGTGCCCAGATTGACTCCCTCATGCAGAATGCTTAG 1653 0.4307 MEDSVAMQKRKQREFALASVSELCSSLIPPPPSEAGSSSPGIARFASGDGSLPELQILRESNQVALNVDLRAAQIFRLGPVQSVCMVEGSDAGKQTSYSRGVAIQFRNEEDSEAFHCVYQQWKKEFNVQGSNLPNGTNAITSKSKFDEKIESSSAKMYFHYYGQLLHQQNMLQDYVRTGTYYAAVIENRADFMGRVVVDVGAGSGILSLFAAQAGAKHVYAVEASEMAEYARKLIAGNPILGQRITVIKGKVEDVELPEKADILISEPMGTLLVNERMLESYVIARDRFLTPHGKMFPSVGRIHMAPFSDEYLFVEIANKALFWQQQNYFGVDLTPLHGTAFQGYFSQPVVDAFDPRLLVAPPSFHVIDFNKIKEEELYEIDIPLRFISTVGARVHGLACWFDVLFNGSTVQRWLTTAPGSPTTHWYQLRCVLSQPIYVMAGQEITGRLHLIAHNAQSYTIYLTLSAKMWGPGAEQGGILQTSSCKLDLKEPYYRMSQPQVYPVSQDQQPQSLIQTQDVNIQSQDLDEAELMQQPSPNSCAQIDSLMQNA* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0967 550 Pfam Ribosomal protein L11 methyltransferase (PrmA) 194 267 - -
Ahy4g0967 550 Gene3D Vaccinia Virus protein VP39 137 298 IPR029063 -
Ahy4g0967 550 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 161 472 IPR029063 -
Ahy4g0967 550 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 5 506 IPR025799 GO:0016274|GO:0018216
Ahy4g0967 550 CDD AdoMet_MTases 197 297 - -
Ahy4g0967 550 Gene3D - 300 508 - -
Ahy4g0967 550 PANTHER HISTONE-ARGININE METHYLTRANSFERASE 1.4-RELATED 5 506 - -
Ahy4g0967 550 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 151 466 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0967 Ahy-Chr4 18611998 18618816 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0967 158 447 C2H2 Transcription Factor Family AT3G12270 33.442 3.42e-37 143
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy14g1061 14 18541369 18548227 Ahy4g0967 4 18611998 18618816 hybridization