Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0962 ATGGATAAAGAGGAAGAAGCACCACAAATTCCCAGAAGAACAAGAAGGTCTTCAACTTCATCTTGGGCATCAACTTCAAATGATGTATCTTCTGTTAAAGTTAATAGCCTTGAACCGCAAACAATCAATGATCTTTTAGTTGGAGGGGAACCTGTTAGCCTGGATGACTTGCTTTCTAATTTTCCCGGTAGAAATAGCCAGATTCGTGAGATTGTGCACCTTTTGGGACCATTGAACACTCCTACGCTTCCTTTGTTTGTGTATGGAGGTGCTTCCACTGGAAAAACCAGTATCATTCTTCAACTATTCAGGCATCTCAACAGGCCACTTGTTTATTCTAGCTGCAGGACATGTTATAATCCGCGTATCTTATTTGAATCTATTCTAAATCAACTACATCTCCATAGAAGAAGTGCTGCCAATGGCTATTCAAATGCAAAGCGCTGTGAGAGACCATCGGATTTTGTTAATTTTCTTCGAGAGGCATTGACAAATGCCATAAACAATCTAAAGGAGAAGTCTGAGAAGTTGATGTCAAGCAAGACGATGCGAGGTGGAATTGGAAACATGATCTACCTGGTATTCGACAATTTTCAGCTTGTTAGGGAGTGGGATAAGAGCTCTACTATATTGCCCTTGCTGTTTAATCTTTATGATATGCTAAAGATGCCTGAGGTGGGTCTGATTTTTATCAGCAATTCTTCTCCAGATACCTTTTACTCTAACATGGGATATGTGGAGCCTATCCCGGTATACTTTCCTGATTATGTAGAAGCTGATATTCGTAAAATATTGTTGAGAAACCAAGCGAACCCGAAGCTATATTCCTCATTTCTGGATGTATCTCTAAGGCCTTTCTTTAGAATTACTAGGCAGATCAATGAATTGTCCACTGCCTTCAAGCCACTATATGAAAAATATTGTGAACCTTTAAGCGATAAAAGCATCGTTCCTAATGAAGACATGAAGAGAAGGCTATTCAGTCATATAATGCTTCATGTCTCCTCCTCTCTAAATGAGATATTTAAGGTTTCATCTCTACCTTTGTCCAAAGTCGAGAGCTCTAAAGAGACAACACAGAAGGGGACTCCAAGGAAATTGGAGCACTGTGAAGAAGTTGCCAAGCTAGATTTTCACATGTCTACTAGTGCAAAATATCTCCTTATTTCAGCATTTCTTGCTTCTAGAAACCCAGCTACTCTTGATGCTTCACTTTTCGATTCCAAAGGAGGTTCTGATAACCGAAAGCGAAAGAGGAAGCCCTCTGAGAAGGTGCCAGAAAAGAAGGAAAGTCTAGAAGAGGAGCTACTAATGAAAGGACCTGGAAGTTTCCCATTAGAGAGGTTGCTAGCCATCTTTCAGTGTATCGTATCGGTGGCAGATGATCCATCCGATGAGGAAGAACAAAATGGTTTCGGACTAGGAGTTGAAGGTGCCTGTGGCGATCTGATGTCTGATGTTCTCTTGCAGCTATCCAGCCTCTGCAATGCTAAATTTATGTTTAAAGGAAGAAGCTGTCCAATTGAAGGCTCAACTCGGTATCGGTCAAGTATATCAGAAGACTTGGCTTTGAAGGTTGCAAGGAGCCTTAAGTTCCCTTTATCAAGTTACTTGTACAAAAGAACCTAG 1629 0.4076 MDKEEEAPQIPRRTRRSSTSSWASTSNDVSSVKVNSLEPQTINDLLVGGEPVSLDDLLSNFPGRNSQIREIVHLLGPLNTPTLPLFVYGGASTGKTSIILQLFRHLNRPLVYSSCRTCYNPRILFESILNQLHLHRRSAANGYSNAKRCERPSDFVNFLREALTNAINNLKEKSEKLMSSKTMRGGIGNMIYLVFDNFQLVREWDKSSTILPLLFNLYDMLKMPEVGLIFISNSSPDTFYSNMGYVEPIPVYFPDYVEADIRKILLRNQANPKLYSSFLDVSLRPFFRITRQINELSTAFKPLYEKYCEPLSDKSIVPNEDMKRRLFSHIMLHVSSSLNEIFKVSSLPLSKVESSKETTQKGTPRKLEHCEEVAKLDFHMSTSAKYLLISAFLASRNPATLDASLFDSKGGSDNRKRKRKPSEKVPEKKESLEEELLMKGPGSFPLERLLAIFQCIVSVADDPSDEEEQNGFGLGVEGACGDLMSDVLLQLSSLCNAKFMFKGRSCPIEGSTRYRSSISEDLALKVARSLKFPLSSYLYKRT* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0962 542 Coils Coil 156 180 - -
Ahy4g0962 542 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 266 IPR027417 -
Ahy4g0962 542 MobiDBLite consensus disorder prediction 409 434 - -
Ahy4g0962 542 Pfam AAA ATPase domain 60 217 IPR041664 -
Ahy4g0962 542 Gene3D - 61 242 IPR027417 -
Ahy4g0962 542 MobiDBLite consensus disorder prediction 13 28 - -
Ahy4g0962 542 Pfam Origin recognition complex (ORC) subunit 5 C-terminus 251 538 IPR020796 GO:0000808|GO:0005634|GO:0006260
Ahy4g0962 542 MobiDBLite consensus disorder prediction 1 28 - -
Ahy4g0962 542 MobiDBLite consensus disorder prediction 404 434 - -
Ahy4g0962 542 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 5 53 540 IPR020796 GO:0000808|GO:0005634|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0962 Ahy-Chr4 18328200 18331176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0962 1 541 Core DNA Replication Machinery Family AT4G29910 58.545 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0962 K02607 - gmx:100784340 786.563