Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0929 ATGTTTCTTGCGAAAGACATGAGGTTCGAGAATACAGCTGGTGCAAAAGGGCACCAAGCAGTTGCACTCAGAAATGTAGGAGATTTTTCAGCTTTTTATAACGGCCACATACATGGTTATCAAGACACTTTGTATGTTCAAGCTAATAGACAATTCTACCACAACTACAAAATTGCTGGAACAGTTGACTTTATCTTCGGTACATCCCCCGCCGTGATCCAGAGAAGCAAGCTCATCGTGAGGATGCCCTTGCCAACTCAGTTCAATGTGTTGGTCGCAGATGGCACCGTCGAAAGGAACATGACTACTGGCATTGTGATTCAGGAATACCAGATTGTTCCAGATTCAATGTTTGACCATGTCAAATACCAAATCAAGACTTATTTGGGTAGGCCATGGAAAGAAGGATCGAGAGCAGTAATTATAGAATCATATCTGGGTGATTGGATTAATCCGGAAGGGTGGGCCCCTCATGCTACCAATGAGATGAAAGGCTTCTTAGATATTAGTGAGTATGAAAATACCGGACCAGCTGCTTCAGTTCATGGAAGAATCAAGTGGAAGGGATATCATGGTATAATAACCAAGAATGAAGCCATGCGATTCACTGTTGGTGAATTCCTCAAGGGTGGACCTAACAATAGTGCTGACCAATGGTTGAACGCTCTTGGTGTTCCTTTTGAAAGTGGTTTTGTAAGACCATAA 705 0.427 MFLAKDMRFENTAGAKGHQAVALRNVGDFSAFYNGHIHGYQDTLYVQANRQFYHNYKIAGTVDFIFGTSPAVIQRSKLIVRMPLPTQFNVLVADGTVERNMTTGIVIQEYQIVPDSMFDHVKYQIKTYLGRPWKEGSRAVIIESYLGDWINPEGWAPHATNEMKGFLDISEYENTGPAASVHGRIKWKGYHGIITKNEAMRFTVGEFLKGGPNNSADQWLNALGVPFESGFVRP* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0929 234 Pfam Pectinesterase 2 210 IPR000070 GO:0030599|GO:0042545
Ahy4g0929 234 SUPERFAMILY Pectin lyase-like 2 228 IPR011050 -
Ahy4g0929 234 Gene3D - 1 231 IPR012334 -
Ahy4g0929 234 ProSitePatterns Pectinesterase signature 2. 58 67 IPR033131 -
Ahy4g0929 234 PANTHER PECTINESTERASE 2 231 - -
Ahy4g0929 234 PANTHER PECTINESTERASE 2 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0929 Ahy-Chr4 17137122 17137826 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0929 2 231 Carbohydrate Esterase AT3G14310 46.522 3.01e-63 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0929 K01051 - gmx:100775246 287.345