Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy4g0928 ATGAAAAAGAAGGAAAAAATTATAGTATCAGTAGTTGTTTCAGTTTCGCTCATCCTTGTGGCGGGAGTTGCTACCGGGATCATAGTGGCCGTTAATAACAAGAAAAGCAATGGCGCTGATGAAGTGCAAAACACTAAAGAAAGGTTCACGAGTCTCATGTGCCACAACACACAAGAGGATCAAAACCTCTGTCGCAAGGTTCTAAGCCAAGTTGATGGGTCCTCTTCTTCTGACCCGGAAGCATACATCGATGCCGCCGTGAATGATATCAGAGACGGCGTCACCACCGCTCTAAAGATGATGACGACTAAGGAGGAGTTCTCCAAAGATGACAACGGAATCAAGATGGCCATTGATGGTTGCAAAGAAGTTATGGAATCCGCATTGAGCAGCCTCGACCTTTTTAGCAATGTGCTTCGCAGCAATCACGACATTAACTCCTTGCAATCGCAAACTCCCGACCTCAAGAACTGGCTTAGCGCCGTTATCTCATATCAGCAATCTTGTGTTGACATTTTTGAGGATCAAAATGAAGGAGAGAGAAAAATCAAAGAACAACTACAAAGCAAGAGTTTGGATCGCGTTGAGAAGGTTTCCATCATAACTCTCGATATTGTTACTGGTTTCGCTAAGATCATTGAAGATCTTGGTCTGCATGTGGAAATGAAACCCATTGCTTCTTCTGGACGTGTTCTTCGCGAAGAGGTTGATAACGAGGGGTTCCCGATTGGTTTTCCTCTTCAGATCGCAAGCTGTTGGCAAAGGATGTGA 771 0.4449 MKKKEKIIVSVVVSVSLILVAGVATGIIVAVNNKKSNGADEVQNTKERFTSLMCHNTQEDQNLCRKVLSQVDGSSSSDPEAYIDAAVNDIRDGVTTALKMMTTKEEFSKDDNGIKMAIDGCKEVMESALSSLDLFSNVLRSNHDINSLQSQTPDLKNWLSAVISYQQSCVDIFEDQNEGERKIKEQLQSKSLDRVEKVSIITLDIVTGFAKIIEDLGLHVEMKPIASSGRVLREEVDNEGFPIGFPLQIASCWQRM* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy4g0928 256 Pfam Plant invertase/pectin methylesterase inhibitor 53 205 IPR006501 GO:0004857
Ahy4g0928 256 CDD PMEI-like_3 52 211 - -
Ahy4g0928 256 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 53 200 IPR035513 -
Ahy4g0928 256 SMART PMEI_2 45 205 IPR006501 GO:0004857
Ahy4g0928 256 TIGRFAM PME_inhib: pectinesterase inhibitor domain 39 205 IPR006501 GO:0004857
Ahy4g0928 256 Gene3D Invertase/pectin methylesterase inhibitor family protein 47 209 IPR035513 -
Ahy4g0928 256 PANTHER PECTINESTERASE 12 227 - -
Ahy4g0928 256 PANTHER PECTINESTERASE 12 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy4g0928 Ahy-Chr4 17135319 17136089 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy4g0928 11 245 Carbohydrate Esterase AT3G62170 29.600 1.01e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy4g0928 K01051 - ahf:112794701 468.774